PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021676155.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 1010aa MW: 111613 Da PI: 6.3376 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.2 | 8.4e-42 | 158 | 235 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021676155.1 158 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 235 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1010 aa Download sequence |
MEARFGVESE AQAHHFYGTG ATEMRAVGKR SLEWDLNDWK WDGDLFIASP LNPVPSGGMG 60 RQFFPVATGI PVNGNSSNSS SSCSDEVNLV IEKGRRELEK RRRVIVIEDD NLDGAEVGSL 120 SLKLGGQGYP ISEKEMRSWE GNSGKRTKLA GGSMSRAVCQ VEDCGADLSN AKDYHRRHKV 180 CEMHSKASKA LVGNVMQRFC QQCSRFHVLQ EFDEGKRSCR RRLAGHNKRR RKTNPEAAGN 240 GNSLNDDQTS SYLLISLLRI LTNMHSNRSD QVTDQDLLSH LLRSLASHAI EHGGRNISGL 300 LQEPRDLLND ANSEVLSTLL SNVEVIPRPI KENLTVPGSG MLQQVGRAHG ANGANMQTSS 360 SVKPSIPSNY PAYSEVRDST AGQIKMNNFD LNDIYVDSDD GAEDIERSPV ATNIGTSSLD 420 CPSWVQQDSH QSSPPQTSGN SDSVSAQSPS SSSGDTQSRT DRIIFKLFGK EPNEFPLVLR 480 AQILGWLSHS PTDIESYIRP GCVILTIYLR QAESTWEELC CNLGSSLSRL LDVSDDAFWR 540 TGWVYIKVQH QVAFVCNGQV VVDTSLSLTS NNYSKILSVK PIAISASERA QFVVKGINLS 600 WPTTRLLCAV EGKYVFQEDT QELMDGVDNL KGYEELQCVS FCCSIPTVSG RGFIEIEDHG 660 FSSNYFPFIV AEEDVCSEIR MLEGVLEFAE TDADVGDTRK MVAQDQAMEF IHEIGWLLHR 720 GQLKSRLGHL DPYTDLFPLK RFKWLMEFSM DHEWCAVVKK LLNILLKGVV GTGEHSSLNL 780 ALSEMGLLHR AVRKNSRSLV ELLLRYVPEK SVPENKSLIG GSHESNLFRP DATGPAGLTP 840 LHIAAGKDGS EDVLDALTDD PGMVGIEAWK SARDSTGFTP EDYARLRGHY LYIHLVKKKI 900 NKGPPLGHVV LDIPGTPADC SINQKQNEGV TTSFEIGQTA KRPIQGPCKL CHQKLDYGTA 960 GRSLLYRPAM LSMVAIAAVC VCVALLFKSC PEVVYVFRPF RWELLDYGPY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 104 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |