PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676120.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 503aa MW: 53975.6 Da PI: 8.2091

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.3e-31	262	320	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_021676120.1 262 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTILITTYEGNHNHP 320 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDKQGRELTF LHSGDFLRQN TGLSDRLTHN SVDTGKSTIK EVDFFSRDRT DDKIHCDQEI 60 KDGSSSAPVD SAVNTGLNLL TSSSGILETA NENKPNNGLK KLQAELDSLH DENKKLRRML 120 DQITKSYKDL QAQLIMAMQK QAQGNRGKQK GEQNGISSPI MSAQQFMDPR PSAALDVNDT 180 SVSDDKAQDV SVSPTNTTEA MSQINPGKQA STEDGLDQTS QSWGSPKSPR LEQGKGEEQV 240 PEVPFRKARV SVRARSEAPL ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ 300 RCAEDKTILI TTYEGNHNHP LPPAATAMAN TISAAAAMLL SGSTTSKESL PSNNTFFPSL 360 PYASTLATLS ASAPFPTITL DLTQSPNPIP FLRAPPSTTF PLPLHGCPQL LGHPMYVPPK 420 VPAAAIPSLQ LGQRQASMVE TVTAAIASDP NFRAALAAAI SSIIGTQRSN DGTSSNTNTP 480 NGGIPGLPGS PQLPQSCTTF STN

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDKQGRELTF LHSGDFLRQN TGLSDRLTHN SVDTGKSTIK EVDFFSRDRT DDKIHCDQEI  60
KDGSSSAPVD SAVNTGLNLL TSSSGILETA NENKPNNGLK KLQAELDSLH DENKKLRRML  120
DQITKSYKDL QAQLIMAMQK QAQGNRGKQK GEQNGISSPI MSAQQFMDPR PSAALDVNDT  180
SVSDDKAQDV SVSPTNTTEA MSQINPGKQA STEDGLDQTS QSWGSPKSPR LEQGKGEEQV  240
PEVPFRKARV SVRARSEAPL ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ  300
RCAEDKTILI TTYEGNHNHP LPPAATAMAN TISAAAAMLL SGSTTSKESL PSNNTFFPSL  360
PYASTLATLS ASAPFPTITL DLTQSPNPIP FLRAPPSTTF PLPLHGCPQL LGHPMYVPPK  420
VPAAAIPSLQ LGQRQASMVE TVTAAIASDP NFRAALAAAI SSIIGTQRSN DGTSSNTNTP  480
NGGIPGLPGS PQLPQSCTTF STN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	9e-86	WRKY family protein