PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676118.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 582aa MW: 63449.6 Da PI: 8.2906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.1	2.4e-11	401	448	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h++ Er+RRd+i +++ L+ l+P++ K++ a++L +A+eY+k L+ XP_021676118.1 401 EVHKQSERKRRDKITKKMRALQALIPNS-----SKVDIASMLDQAIEYLKTLE 448 679**********************8.....7**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MADKFVELVW ENGQILMRGR SNSPSCITYS SLHSTEPHAK TRAAETYTSK GPSLGTENSV 60 LDLDDSPLTD LPDRKELSKH KRSVQDHHHS DHLFPGFYKN NFNFCLETPR NKTYDEYLAE 120 SQIVPECKDE SLKLENNASP VEIPQLTTAK NGQLHESSLQ QCHASVSISR SIAIGSLNMS 180 SMGRLPNSNL QQLNSRPDKD FGLRNFSLFL TPGVLSKADD QHQGATESAG GPSSLRVQDL 240 KSNKDKTPAG DKALALEPGI GSTSAKDIHK HQDLVTIKTD QTQQIGNPSD ESPPDELSEA 300 PVQKNAIKSK RFEDQLFPSS TSSLPANTVK GNPDREKSKD QLAAATSICS RGASNDISYS 360 SLRRKNKDEE MMASPSEIAE GDQQVPKPAA ARAGAKRRRS EVHKQSERKR RDKITKKMRA 420 LQALIPNSSK VDIASMLDQA IEYLKTLELQ LQVMSQGTGF CMPPMIVPTG MQHIQMQATN 480 FAHFSTMGLG MAMRMPMGVG CSPAIFSNSA MLGFPARQVL PMPLSLVPFI PFAGWPSTYA 540 VPVSATSGAA TPVELMRSGS APSLSSKDAV IQNINSETSN TR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MADKFVELVW ENGQILMRGR SNSPSCITYS SLHSTEPHAK TRAAETYTSK GPSLGTENSV  60
LDLDDSPLTD LPDRKELSKH KRSVQDHHHS DHLFPGFYKN NFNFCLETPR NKTYDEYLAE  120
SQIVPECKDE SLKLENNASP VEIPQLTTAK NGQLHESSLQ QCHASVSISR SIAIGSLNMS  180
SMGRLPNSNL QQLNSRPDKD FGLRNFSLFL TPGVLSKADD QHQGATESAG GPSSLRVQDL  240
KSNKDKTPAG DKALALEPGI GSTSAKDIHK HQDLVTIKTD QTQQIGNPSD ESPPDELSEA  300
PVQKNAIKSK RFEDQLFPSS TSSLPANTVK GNPDREKSKD QLAAATSICS RGASNDISYS  360
SLRRKNKDEE MMASPSEIAE GDQQVPKPAA ARAGAKRRRS EVHKQSERKR RDKITKKMRA  420
LQALIPNSSK VDIASMLDQA IEYLKTLELQ LQVMSQGTGF CMPPMIVPTG MQHIQMQATN  480
FAHFSTMGLG MAMRMPMGVG CSPAIFSNSA MLGFPARQVL PMPLSLVPFI PFAGWPSTYA  540
VPVSATSGAA TPVELMRSGS APSLSSKDAV IQNINSETSN TR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	396	411	KRRRSEVHKQSERKRR
2	397	412	KRRRSEVHKQSERKRR
3	407	412	ERKRRD
4	408	413	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46970.1	6e-30	bHLH family protein