PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675904.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 299aa MW: 33764.2 Da PI: 7.0071

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.4e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_021675904.1 13 RGLWSPEEDEKLIKFITTHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++ ++d ++ lG++ W+ Ia++++ gRt++++k++w++ XP_021675904.1 66 RGSFTAQEEKTIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGHQCCSKQK VKRGLWSPEE DEKLIKFITT HGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT AQEEKTIIDI HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGP 120 SADSHYQPTF SSSVFTVSSQ MKDFSMDVKK TPFTPSIPSP DANYFCLHPL HISSTITTCC 180 VHQNSNIQAF LDCASQSVTM GSNPISCSTS NPSGAGIIEE KCLWSGDIES TQTLRHEQMQ 240 VEQVVEIEKT NELNAGQNMD ALFESSNFDF DFVECTQMPE MYYSVRPIDQ LTWDSQALQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	8e-78	MYB family protein