PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675703.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 479aa MW: 52185.1 Da PI: 6.3838

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.5	3.2e-29	114	171	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK vkg+ef rsYY+Ct+++C+vkk++e+s+ d+++ +i+Y g+H+h+k XP_021675703.1 114 EDGYHWRKYGQKLVKGNEFIRSYYKCTHPSCQVKKQLEHSQ-DGQIADIIYFGQHDHPK 171 7*************************************9.*************85 PP
2	WRKY	105.6	2.5e-33	282	340	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC+s+gCpvkk+ver+++dpkvv++ Yeg+H+h+ XP_021675703.1 282 VNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVITSYEGQHDHD 340 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MTSKVLMVSS REGTDEFASD ELQKQQSPDN GSHTTQEIDD NGIHTSQNEE VTPVTSDKTM 60 QDANAGVHIS QLDKEGSISS IIPGKVSQTP GPRSSALQSG QEGRIPIVRE KVSEDGYHWR 120 KYGQKLVKGN EFIRSYYKCT HPSCQVKKQL EHSQDGQIAD IIYFGQHDHP KPEHNLPQAV 180 GFVLPVVKET ADEPSSTGTE EDRAPHLLKS TSTSKISVGT RSENAKGALS ESNKIKDEVD 240 NDDEPRSKRQ KKGNHNVELM VVDKPTSEPR HVIQTLSEID IVNDGYRWRK YGQKLVKGNP 300 NPRSYYRCSS PGCPVKKHVE RASHDPKVVI TSYEGQHDHD VPPSRTVTHN ATGVSASNMN 360 SGESGTKSGA SDGVPNNSLD PSGNSKEQLN SKSDSGDDGK SSKPWNGKSS AKEGSGAAVM 420 DTVDNTSSMS ECRSIEQHDG ESRTESKVIC AAYSAHAITP VPETNPNEQR IPNAEPVQS

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MTSKVLMVSS REGTDEFASD ELQKQQSPDN GSHTTQEIDD NGIHTSQNEE VTPVTSDKTM  60
QDANAGVHIS QLDKEGSISS IIPGKVSQTP GPRSSALQSG QEGRIPIVRE KVSEDGYHWR  120
KYGQKLVKGN EFIRSYYKCT HPSCQVKKQL EHSQDGQIAD IIYFGQHDHP KPEHNLPQAV  180
GFVLPVVKET ADEPSSTGTE EDRAPHLLKS TSTSKISVGT RSENAKGALS ESNKIKDEVD  240
NDDEPRSKRQ KKGNHNVELM VVDKPTSEPR HVIQTLSEID IVNDGYRWRK YGQKLVKGNP  300
NPRSYYRCSS PGCPVKKHVE RASHDPKVVI TSYEGQHDHD VPPSRTVTHN ATGVSASNMN  360
SGESGTKSGA SDGVPNNSLD PSGNSKEQLN SKSDSGDDGK SSKPWNGKSS AKEGSGAAVM  420
DTVDNTSSMS ECRSIEQHDG ESRTESKVIC AAYSAHAITP VPETNPNEQR IPNAEPVQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	8e-96	WRKY family protein