PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021675369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 296aa MW: 32023.5 Da PI: 8.1576 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 99.2 | 4.2e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l+ a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+ XP_021675369.1 4 SCNGCRVLRKGCSDNCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLIYAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQA 98 6********************************************************************************************** PP DUF260 91 kaelallke 99 ++e++l ++ XP_021675369.1 99 AVEAVLKGT 107 **9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MRMSCNGCRV LRKGCSDNCS IRPCLQWIKS PESQANATVF LAKFYGRAGL MNLIYAGPEH 60 LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGTPIT PINSEAAANG 120 HGPPLKAYDI RHVSKDENSS ASKDPNRVKT RCRVRRVEKL KVGNNNKPSG GVGFGSVLET 180 TARGELTRSI SHESSVSHLS ELAMVEGESK DTESMVSEET AEAPLLFGAE PESAAKGNEG 240 VHDHVSTEIA GLGLELTLGL EPVSRASHVV PVKKRKLESY ENACKIELGL VYPAWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 6e-99 | LBD family protein |