PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675304.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 610aa MW: 66035.4 Da PI: 7.9953

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44	4.3e-14	119	158	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C N+ e+ XP_021675304.1 119 RQKQCNCKHSRCLKLYCECFASGTYCDG-CNCANCYNNVEN 158 689***********************.******9875 PP
2	TCR	50.8	3.2e-16	203	242	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_021675304.1 203 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 242 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MGEGEGSEFP PKKAAQSDTQ VSSDFPAKKL ARQLDFTQGN VVLPDHPQSQ QQQQPVTLPL 60 QQKSVVVTPH GQLQQQPQMV AMAAAPPPQQ HPPARTVKPE SPKSKPRPNA ELKEGTPKRQ 120 KQCNCKHSRC LKLYCECFAS GTYCDGCNCA NCYNNVENEA ARREAVEATL ERNPNAFRPK 180 IASSPHGTRD SREENLEGLV LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN 240 FEGSEERQAL FHGDHANNMA YIQQAANAAI TGAIGSSGYT SPPVSKKRKG QELLFGPAAK 300 DPSFHRLGHF QQLACRFHLH QAVHIRPSAP SFSLSVNPVA RATSTANLGP SKFTYKSLLA 360 DIIQPQDLRE LCSVLVVVSG EAAKTLADQR NATEKRVDDH AETSLASSTQ DSLQGQKEAD 420 VKKITSYDCS SANQADKVGP DDSSSDGADM PKGRPMSPGT LALMCDEQDT MFMAAASPNG 480 LTSHGCSATS QLPCGQGMAD IYAEQERIVL TKFRDCLNRL ITFGEIKETK CSSLARTELG 540 NQEDQLINGT TSARAEFGKQ QGPFSNGIAK HITIPTSKTA QMVTSMVATS SNDLPKVPAL 600 PQNGDNKPMT

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MGEGEGSEFP PKKAAQSDTQ VSSDFPAKKL ARQLDFTQGN VVLPDHPQSQ QQQQPVTLPL  60
QQKSVVVTPH GQLQQQPQMV AMAAAPPPQQ HPPARTVKPE SPKSKPRPNA ELKEGTPKRQ  120
KQCNCKHSRC LKLYCECFAS GTYCDGCNCA NCYNNVENEA ARREAVEATL ERNPNAFRPK  180
IASSPHGTRD SREENLEGLV LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN  240
FEGSEERQAL FHGDHANNMA YIQQAANAAI TGAIGSSGYT SPPVSKKRKG QELLFGPAAK  300
DPSFHRLGHF QQLACRFHLH QAVHIRPSAP SFSLSVNPVA RATSTANLGP SKFTYKSLLA  360
DIIQPQDLRE LCSVLVVVSG EAAKTLADQR NATEKRVDDH AETSLASSTQ DSLQGQKEAD  420
VKKITSYDCS SANQADKVGP DDSSSDGADM PKGRPMSPGT LALMCDEQDT MFMAAASPNG  480
LTSHGCSATS QLPCGQGMAD IYAEQERIVL TKFRDCLNRL ITFGEIKETK CSSLARTELG  540
NQEDQLINGT TSARAEFGKQ QGPFSNGIAK HITIPTSKTA QMVTSMVATS SNDLPKVPAL  600
PQNGDNKPMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	0.0	CPP family protein