PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675294.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 357aa MW: 39156.4 Da PI: 6.9953

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00047	219	257	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_021675294.1 219 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 257 6677889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MNRGVLQSSP PLQQIMAGNP NWWNINNMRP PTHQQTSPFL PPPSLFPQYT HSSSSSSSSS 60 SSSLTIPSWH DNPDQLPESW SQLLMGGLVD EDNKGNINHF QAKKLENWEE QMLHHQASSA 120 PAIVDVKQEN SASSYVYGHA NEDFQAAKPS WSQIIPPASS PKSCVTSFSS NMLDFSTNKG 180 DGRHPPPDRS SECNSTATGG ALKKARVQPS STQSTFKVRK EKLGDRITAL HQLVSPFGKT 240 DTASVLLEAI GYIRFLQSQI EALSLPYLGN GSSNMRQQQQ QSVQGERNCI FPEDPGQLLN 300 DNCVKRKGAS EQQDYNEEPK KDLRSRGLCL VPVSCTLQVG SDNGADYWAP ALGGGFR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MNRGVLQSSP PLQQIMAGNP NWWNINNMRP PTHQQTSPFL PPPSLFPQYT HSSSSSSSSS  60
SSSLTIPSWH DNPDQLPESW SQLLMGGLVD EDNKGNINHF QAKKLENWEE QMLHHQASSA  120
PAIVDVKQEN SASSYVYGHA NEDFQAAKPS WSQIIPPASS PKSCVTSFSS NMLDFSTNKG  180
DGRHPPPDRS SECNSTATGG ALKKARVQPS STQSTFKVRK EKLGDRITAL HQLVSPFGKT  240
DTASVLLEAI GYIRFLQSQI EALSLPYLGN GSSNMRQQQQ QSVQGERNCI FPEDPGQLLN  300
DNCVKRKGAS EQQDYNEEPK KDLRSRGLCL VPVSCTLQVG SDNGADYWAP ALGGGFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-105	bHLH family protein