PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674903.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 350aa MW: 38875.3 Da PI: 9.9082

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	99.1	7.8e-31	51	186	2	118
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg...... 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl + k i++l+ ++ ++ ++++ s+ s +s+ XP_021674903.1 51 FGRKDRHSKVCTVKGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKNDIDKLPPLQIPQGFGQfhDQQMLLSQLS--NSSlvpsff 143 589*************************************************************44444222222222222222..111334555 PP TCP 89 .................kaaksaakskksqksaasalnlakesraka 118 + +s+ +++ q+ a ++ ++ + a+a XP_021674903.1 144 dsnsdggfhslgikingN--SSSLDGRDHQHTVA--NSNKNWEAAEA 186 555556677777776431..33322222222222..22222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MITGSREKVF QAKGEGDAAN DNKLSKAAPS TPSRHWSAFR NPRIVRVSRS FGRKDRHSKV 60 CTVKGLRDRR IRLSVPTAIQ LYDLQDRLGL SQPSKVIDWL LDATKNDIDK LPPLQIPQGF 120 GQFHDQQMLL SQLSNSSLVP SFFDSNSDGG FHSLGIKING NSSSLDGRDH QHTVANSNKN 180 WEAAEASLRS GRSNEVEVSI ADKGKWIKTN EQENQNWFCN YTTTGKVSAQ KFFPLTSSST 240 QSSLPGLPNN PISFNPYFHW DQFPIHGFLP QTETSLNSNS TVSLPPSSSS QPFSSASQFF 300 LCPLATMSSF FPQYPPYAAT PLENESKEIN HFRLLSSGSQ HILPNSRAKS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MITGSREKVF QAKGEGDAAN DNKLSKAAPS TPSRHWSAFR NPRIVRVSRS FGRKDRHSKV  60
CTVKGLRDRR IRLSVPTAIQ LYDLQDRLGL SQPSKVIDWL LDATKNDIDK LPPLQIPQGF  120
GQFHDQQMLL SQLSNSSLVP SFFDSNSDGG FHSLGIKING NSSSLDGRDH QHTVANSNKN  180
WEAAEASLRS GRSNEVEVSI ADKGKWIKTN EQENQNWFCN YTTTGKVSAQ KFFPLTSSST  240
QSSLPGLPNN PISFNPYFHW DQFPIHGFLP QTETSLNSNS TVSLPPSSSS QPFSSASQFF  300
LCPLATMSSF FPQYPPYAAT PLENESKEIN HFRLLSSGSQ HILPNSRAKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	4e-50	TCP family protein