PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674883.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 526aa    MW: 56724.7 Da    PI: 6.4589
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.19.2e-42175250277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     Cqv+gC++dls+ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q
  XP_021674883.1 175 CQVHGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGMEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQ 250
                     **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MHSCSYVPGG KGFVSNETFS SSDAIAKSKN ALMDWDLKTT CSFGNNVVVS SQQAIENHGF  60
RELTYQELMG KQLPDNSIGD ALSGQVDGGK IITPFMVNTN AFSVEDESSS GLSSSVVDSN  120
SRDSSFIDLK LGRFGDPADG QNSRISKGAS TLSSSESSAP PKRVRLGVNS QTPHCQVHGC  180
NKDLSSSKEY HKRHKVCEVH SKTAKVIVNG MEQRFCQQCS RFHLLVEFDD GKRSCRKRLA  240
GHNERRRKPQ VGFHSGRTER LLQSYNGFAT SKFHGTALAS FICQDILPTG ALHSEKYGTN  300
DWCKHIKVED GSDFSPLASI PVTRSIFIAS ASQYPNDLGG SNSDSRSLIQ DPSLGYEDLT  360
AFDTVSTIQG LSGITSSSCA LSLLSSQSHN YLSHSSGISM ACPLLVPGSN THYGVNQVSE  420
KLTGDSSQAS TSVVPNKFSS SGASSAEGSQ LGSILISDGS DAINFDLTDG IYQGSNFMNA  480
EDHLSCEDGT TIDLLQLSSQ LQQVEHQKQS MQAKQENDAF CWPHIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.11e-46SBP family protein