PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674882.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 531aa MW: 57087 Da PI: 6.3726

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.1	9.3e-42	175	250	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC++dls+ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_021674882.1 175 CQVHGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGMEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQ 250 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MHSCSYVPGG KGFVSNETFS SSDAIAKSKN ALMDWDLKTT CSFGNNVVVS SQQAIENHGF 60 RELTYQELMG KQLPDNSIGD ALSGQVDGGK IITPFMVNTN AFSVEDESSS GLSSSVVDSN 120 SRDSSFIDLK LGRFGDPADG QNSRISKGAS TLSSSESSAP PKRVRLGVNS QTPHCQVHGC 180 NKDLSSSKEY HKRHKVCEVH SKTAKVIVNG MEQRFCQQCS RFHLLVEFDD GKRSCRKRLA 240 GHNERRRKPQ VGFHSGRTER LLQSYNGFAT SKFHGTALAS FICQDILPTG ALHSEKYGTN 300 DWCKHIKVED GSDFSPLASI PVTTATSTGS IFIASASQYP NDLGGSNSDS RSLIQDPSLG 360 YEDLTAFDTV STIQGLSGIT SSSCALSLLS SQSHNYLSHS SGISMACPLL VPGSNTHYGV 420 NQVSEKLTGD SSQASTSVVP NKFSSSGASS AEGSQLGSIL ISDGSDAINF DLTDGIYQGS 480 NFMNAEDHLS CEDGTTIDLL QLSSQLQQVE HQKQSMQAKQ ENDAFCWPHI T

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MHSCSYVPGG KGFVSNETFS SSDAIAKSKN ALMDWDLKTT CSFGNNVVVS SQQAIENHGF  60
RELTYQELMG KQLPDNSIGD ALSGQVDGGK IITPFMVNTN AFSVEDESSS GLSSSVVDSN  120
SRDSSFIDLK LGRFGDPADG QNSRISKGAS TLSSSESSAP PKRVRLGVNS QTPHCQVHGC  180
NKDLSSSKEY HKRHKVCEVH SKTAKVIVNG MEQRFCQQCS RFHLLVEFDD GKRSCRKRLA  240
GHNERRRKPQ VGFHSGRTER LLQSYNGFAT SKFHGTALAS FICQDILPTG ALHSEKYGTN  300
DWCKHIKVED GSDFSPLASI PVTTATSTGS IFIASASQYP NDLGGSNSDS RSLIQDPSLG  360
YEDLTAFDTV STIQGLSGIT SSSCALSLLS SQSHNYLSHS SGISMACPLL VPGSNTHYGV  420
NQVSEKLTGD SSQASTSVVP NKFSSSGASS AEGSQLGSIL ISDGSDAINF DLTDGIYQGS  480
NFMNAEDHLS CEDGTTIDLL QLSSQLQQVE HQKQSMQAKQ ENDAFCWPHI T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-46	SBP family protein