PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 557aa MW: 60075.4 Da PI: 6.3055 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133 | 1e-41 | 175 | 250 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC++dls+ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_021674880.1 175 CQVHGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGMEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQ 250 **************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MHSCSYVPGG KGFVSNETFS SSDAIAKSKN ALMDWDLKTT CSFGNNVVVS SQQAIENHGF 60 RELTYQELMG KQLPDNSIGD ALSGQVDGGK IITPFMVNTN AFSVEDESSS GLSSSVVDSN 120 SRDSSFIDLK LGRFGDPADG QNSRISKGAS TLSSSESSAP PKRVRLGVNS QTPHCQVHGC 180 NKDLSSSKEY HKRHKVCEVH SKTAKVIVNG MEQRFCQQCS RFHLLVEFDD GKRSCRKRLA 240 GHNERRRKPQ VGFHSGRTER LLQSYNGFAT SKFHGTALAS FICQDILPTG ALHSEKYGTN 300 DWCKHIKVED GSDFSPLASI PVTSGYLHSK TLFPSDNLDK VFIIFHDIEA ATSTGSIFIA 360 SASQYPNDLG GSNSDSRSLI QDPSLGYEDL TAFDTVSTIQ GLSGITSSSC ALSLLSSQSH 420 NYLSHSSGIS MACPLLVPGS NTHYGVNQVS EKLTGDSSQA STSVVPNKFS SSGASSAEGS 480 QLGSILISDG SDAINFDLTD GIYQGSNFMN AEDHLSCEDG TTIDLLQLSS QLQQVEHQKQ 540 SMQAKQENDA FCWPHIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 2e-46 | SBP family protein |