PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674880.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 557aa    MW: 60075.4 Da    PI: 6.3055
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1331e-41175250277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     Cqv+gC++dls+ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q
  XP_021674880.1 175 CQVHGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGMEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQ 250
                     **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MHSCSYVPGG KGFVSNETFS SSDAIAKSKN ALMDWDLKTT CSFGNNVVVS SQQAIENHGF  60
RELTYQELMG KQLPDNSIGD ALSGQVDGGK IITPFMVNTN AFSVEDESSS GLSSSVVDSN  120
SRDSSFIDLK LGRFGDPADG QNSRISKGAS TLSSSESSAP PKRVRLGVNS QTPHCQVHGC  180
NKDLSSSKEY HKRHKVCEVH SKTAKVIVNG MEQRFCQQCS RFHLLVEFDD GKRSCRKRLA  240
GHNERRRKPQ VGFHSGRTER LLQSYNGFAT SKFHGTALAS FICQDILPTG ALHSEKYGTN  300
DWCKHIKVED GSDFSPLASI PVTSGYLHSK TLFPSDNLDK VFIIFHDIEA ATSTGSIFIA  360
SASQYPNDLG GSNSDSRSLI QDPSLGYEDL TAFDTVSTIQ GLSGITSSSC ALSLLSSQSH  420
NYLSHSSGIS MACPLLVPGS NTHYGVNQVS EKLTGDSSQA STSVVPNKFS SSGASSAEGS  480
QLGSILISDG SDAINFDLTD GIYQGSNFMN AEDHLSCEDG TTIDLLQLSS QLQQVEHQKQ  540
SMQAKQENDA FCWPHIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.12e-46SBP family protein