PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674851.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 563aa MW: 61898.6 Da PI: 8.578

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.8e-16	263	311	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r +h++ E+rRR++iN++f+ Lrel+P+ ++K +Ka+ L +++e+I+ L XP_021674851.1 263 RSKHSATEQRRRSKINDRFQMLRELIPHG----DQKRDKASFLLEVIEHIQFL 311 889***********************7....7***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MELPQQQRLF ETEGRKPTHD FLSLYSHSAV QQDPRPPSQG LLKTHDFLQP LERAGKATAK 60 EETTGEISYI EKAPPPPPPP SVEHILPGGI GTYSISHISN YFNQRIPKPE GSTIFTVAQA 120 SSTDKNEEHS NCSSYTGSGF TLWEESALKV KPGKENDGER SDTVRESGAA KALHWTSSER 180 PSQSSTNTHR NSFSSLSSSQ PSGQNGQSFI EMIKSAKVSS QDDNSDDEEE FNLKKESPSL 240 MRKGELRVKV DGKRTEQKAN TPRSKHSATE QRRRSKINDR FQMLRELIPH GDQKRDKASF 300 LLEVIEHIQF LREKVQKYEG SYQGWNHEPA KLGNGNRPTE SYIDQSRGMN SGAGPELVST 360 AKLDEKNITL SPTIPGSTQN PVESDMRSAT AFKPLDHRPE MTNKAMPFPM ALKPNYFNSG 420 RSGDAVAQVS PRLVSDAENG AYQPQTPSHH VRSCISDGGV AGDKLKEQEL SIEGGTINIS 480 SVYSQGLLNT LTQALQSSGV DLSQASVSVQ IELGKRGNRR PIIPASIVKD NEVPSSNQGT 540 IRPRVSSGEE SHQASKKIKT SKS

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MELPQQQRLF ETEGRKPTHD FLSLYSHSAV QQDPRPPSQG LLKTHDFLQP LERAGKATAK  60
EETTGEISYI EKAPPPPPPP SVEHILPGGI GTYSISHISN YFNQRIPKPE GSTIFTVAQA  120
SSTDKNEEHS NCSSYTGSGF TLWEESALKV KPGKENDGER SDTVRESGAA KALHWTSSER  180
PSQSSTNTHR NSFSSLSSSQ PSGQNGQSFI EMIKSAKVSS QDDNSDDEEE FNLKKESPSL  240
MRKGELRVKV DGKRTEQKAN TPRSKHSATE QRRRSKINDR FQMLRELIPH GDQKRDKASF  300
LLEVIEHIQF LREKVQKYEG SYQGWNHEPA KLGNGNRPTE SYIDQSRGMN SGAGPELVST  360
AKLDEKNITL SPTIPGSTQN PVESDMRSAT AFKPLDHRPE MTNKAMPFPM ALKPNYFNSG  420
RSGDAVAQVS PRLVSDAENG AYQPQTPSHH VRSCISDGGV AGDKLKEQEL SIEGGTINIS  480
SVYSQGLLNT LTQALQSSGV DLSQASVSVQ IELGKRGNRR PIIPASIVKD NEVPSSNQGT  540
IRPRVSSGEE SHQASKKIKT SKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-111	bHLH family protein