PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674850.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 566aa MW: 62281.1 Da PI: 8.578

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.8e-16	263	311	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r +h++ E+rRR++iN++f+ Lrel+P+ ++K +Ka+ L +++e+I+ L XP_021674850.1 263 RSKHSATEQRRRSKINDRFQMLRELIPHG----DQKRDKASFLLEVIEHIQFL 311 889***********************7....7***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MELPQQQRLF ETEGRKPTHD FLSLYSHSAV QQDPRPPSQG LLKTHDFLQP LERAGKATAK 60 EETTGEISYI EKAPPPPPPP SVEHILPGGI GTYSISHISN YFNQRIPKPE GSTIFTVAQA 120 SSTDKNEEHS NCSSYTGSGF TLWEESALKV KPGKENDGER SDTVRESGAA KALHWTSSER 180 PSQSSTNTHR NSFSSLSSSQ PSGQNGQSFI EMIKSAKVSS QDDNSDDEEE FNLKKESPSL 240 MRKGELRVKV DGKRTEQKAN TPRSKHSATE QRRRSKINDR FQMLRELIPH GDQKRDKASF 300 LLEVIEHIQF LREKVQKYEG SYQGWNHEPA KLVPWGNGNR PTESYIDQSR GMNSGAGPEL 360 VSTAKLDEKN ITLSPTIPGS TQNPVESDMR SATAFKPLDH RPEMTNKAMP FPMALKPNYF 420 NSGRSGDAVA QVSPRLVSDA ENGAYQPQTP SHHVRSCISD GGVAGDKLKE QELSIEGGTI 480 NISSVYSQGL LNTLTQALQS SGVDLSQASV SVQIELGKRG NRRPIIPASI VKDNEVPSSN 540 QGTIRPRVSS GEESHQASKK IKTSKS

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MELPQQQRLF ETEGRKPTHD FLSLYSHSAV QQDPRPPSQG LLKTHDFLQP LERAGKATAK  60
EETTGEISYI EKAPPPPPPP SVEHILPGGI GTYSISHISN YFNQRIPKPE GSTIFTVAQA  120
SSTDKNEEHS NCSSYTGSGF TLWEESALKV KPGKENDGER SDTVRESGAA KALHWTSSER  180
PSQSSTNTHR NSFSSLSSSQ PSGQNGQSFI EMIKSAKVSS QDDNSDDEEE FNLKKESPSL  240
MRKGELRVKV DGKRTEQKAN TPRSKHSATE QRRRSKINDR FQMLRELIPH GDQKRDKASF  300
LLEVIEHIQF LREKVQKYEG SYQGWNHEPA KLVPWGNGNR PTESYIDQSR GMNSGAGPEL  360
VSTAKLDEKN ITLSPTIPGS TQNPVESDMR SATAFKPLDH RPEMTNKAMP FPMALKPNYF  420
NSGRSGDAVA QVSPRLVSDA ENGAYQPQTP SHHVRSCISD GGVAGDKLKE QELSIEGGTI  480
NISSVYSQGL LNTLTQALQS SGVDLSQASV SVQIELGKRG NRRPIIPASI VKDNEVPSSN  540
QGTIRPRVSS GEESHQASKK IKTSKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-113	bHLH family protein