PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021674386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 325aa MW: 36429.6 Da PI: 10.1133 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.7 | 1.8e-31 | 255 | 313 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 D+y+WrKYGqK++kgs++prsYY+C+ gCp++k+ver+ +dp+++++tYeg+Hnh+k XP_021674386.1 255 DEYTWRKYGQKPIKGSPYPRSYYKCSRMrGCPARKHVERCLQDPTMLVVTYEGDHNHSK 313 9*************************988****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 325 aa Download sequence |
MKETSGVCIS MTPRWDFKVL EAAQSTFKQA YHLFSCISDK NRKRSIHEVS LIAQGAVNEF 60 RYLLTLLDGS SQSDPKRIRK GPLPLSYDID PVELMDCPSS VPQSSGCNLT TQPRPHIIRQ 120 LFPLQSIQAT NSLIPINSFS FDRKRNKSKA NVDVTNSLTV SNLSLSQPGT SFLSLDRRGG 180 PDKRLVHYSA SETLGSRDNS SVFPKSTSGI MSEETSAKCR ASTGECHCSK RRKSRIKKII 240 QVPALSGKLA EIPPDEYTWR KYGQKPIKGS PYPRSYYKCS RMRGCPARKH VERCLQDPTM 300 LVVTYEGDHN HSKLTFQSPN VLIQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G30590.1 | 8e-45 | WRKY family protein |