PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674098.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 406aa MW: 46781.4 Da PI: 6.58

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.1	2e-27	84	165	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y+++++ XP_021674098.1 84 WVQDETRSLIAFRREMDRLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEID 165 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ 60 MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM 120 REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP 180 TPTKVDSYMQ FADKGFDDTS ISFGPVEELC ISLVEVPWCA ASGRPTLNLE RRLDHDGHPL 240 AITAAEAVAA GGVPPWNWRE TPGNGAESQS FGGRVITVKY GDYTRRIGID GSADAIKEAI 300 KSAFRLRTKR AFWLEDEDQI IRSLDRDMPV GNYTLQLDEG LVVKVCLYDD SDHLPVHTEE 360 KIFYTEDDYR DFLTRRGWSC LREFDGYRNI DNMDDLRPGA IYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ  60
MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM  120
REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP  180
TPTKVDSYMQ FADKGFDDTS ISFGPVEELC ISLVEVPWCA ASGRPTLNLE RRLDHDGHPL  240
AITAAEAVAA GGVPPWNWRE TPGNGAESQS FGGRVITVKY GDYTRRIGID GSADAIKEAI  300
KSAFRLRTKR AFWLEDEDQI IRSLDRDMPV GNYTLQLDEG LVVKVCLYDD SDHLPVHTEE  360
KIFYTEDDYR DFLTRRGWSC LREFDGYRNI DNMDDLRPGA IYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein