PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-X1 | ||||||||
Protein Properties | Length: 881aa MW: 98678.1 Da PI: 8.2913 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 16 | 2.6e-05 | 195 | 213 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C lCH+GpCp+Cp+ XP_021674062.1 195 CG-HYCLLLCHPGPCPSCPK 213 **.***************96 PP | |||||||
2 | zf-NF-X1 | 24.5 | 5.8e-08 | 247 | 265 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+HkC++ CH G+CppC+ XP_021674062.1 247 CGIHKCKERCHDGDCPPCQ 265 ******************8 PP | |||||||
3 | zf-NF-X1 | 17.2 | 1.1e-05 | 428 | 453 | 1 | 20 |
zf-NF-X1 1 CG......kHkCqklCHeGpCppCpq 20 CG +HkC ++CH+G C pCp+ XP_021674062.1 428 CGrrlpckNHKCPAPCHRGACAPCPL 453 777777779***************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 881 aa Download sequence |
MSSANCQQPL SDSDCDSDPD QSHTESHHGN RHRHTDFSNS IFKSYFEHTT NQSQSSNSPP 60 TPHDLSKIQS FLNSSSSGAL SCLICLERIK PSDPTWSCTS LCYAVFHLLC IQSWARQASD 120 LSAYRAATRL PISPDRAAET STWNCPKCRS VYAKSQIPKT YFCFCGNVEN PPNDNPWILP 180 HSCGEVCDRP LKNSCGHYCL LLCHPGPCPS CPKLVKAKCF CGKIEDVRRC GLKLFSCNNF 240 CDKLLDCGIH KCKERCHDGD CPPCQARGFY GCYCGRKKEE RKCCERGFQC ENPCERLLGC 300 GKHVCERGCH SGECGLCPLQ GKRTCPCGKN VYEGIACDVA VPLCGGTCDK ILSCGLHRCH 360 ERCHRGGCIE TCRLVVTKSC RCGGLKKEVP CYQDLTCERK CQRMRDCGRH ACKRRCCDGD 420 CPPCGEICGR RLPCKNHKCP APCHRGACAP CPLMVTISCA CGETHFEVPC GIEMNQKPPK 480 CRKLCGIPPL CRHGSDSKPH RCHYGACPPC QLLCEEEYPC GHTCKLRCHG PRPPPNPEFT 540 LKPKKKKPNH QSECTPGTSC PPCPELVWRS CVGQHLGAER MMFCSNRALF SCDNLCGNPL 600 PCGNHYCTKT CHALKSQSQK SLAQRSGEPC EECHLPCEKE RKPTCPHPCP LSCHPGECPP 660 CKVLVKRACH CGSMVHVFEC IYYNSLSEKE QMTVRSCGGS CHRKLPNCTH LCPETCHPGQ 720 CPSSDKCSKK VTVRCQCQTL KKEWLCQDVQ AAYQKAGRDP KDVSKNHFGI GLLPCNSDCK 780 SKVKVVDQEL HLRKSKDFEE KEPDTEKNTS KRRKRRERVQ ETKQISKLQK YVATMKWLLL 840 VVILVVTLVA AAYFGYKGLL WLSDWMNEVE EQRLRRRYPR I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05660.1 | 0.0 | NF-X1 family protein |