PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021673538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 896aa MW: 103263 Da PI: 8.3343 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.8 | 5.8e-26 | 97 | 205 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkek.dgkw 76 +fY+eYAk+vGF + +++s++s+ +g++++++fvC+++g+++e + + +++ r +r+ ++t+Cka+++vk+++ dgkw XP_021673538.1 97 SFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGTKREPSMTemahpvmdtdvatsipvkRKRGRINRSWSKTDCKACMHVKRRQhDGKW 191 5****************************************9999999**************998888899******************99**** PP FAR1 77 evtkleleHnHela 90 +v ++ +eHnH++ XP_021673538.1 192 VVRSFIKEHNHAIY 205 ***********975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 896 aa Download sequence |
MFSMGIDLEQ PSGECHKEDS RPNVTADMVD SGLHDRNRVA VDCCNVAGTD KDRPTVSGRV 60 FDGTHKVYVG DGINLNAAKD LEPHDGMEFE SKEEAFSFYK EYAKSVGFAT IIKASRRSRI 120 SGKFIDAKFV CTRYGTKREP SMTEMAHPVM DTDVATSIPV KRKRGRINRS WSKTDCKACM 180 HVKRRQHDGK WVVRSFIKEH NHAIYPDQAY FFRGHRNIGL GSNNVDALHA IRARTKKVYV 240 SMSRQSGGYK KQENQKRSLT NISGSTQHLA LDEGDAQVML EHFRYMQDEN PNFFYAIDLN 300 EEQCLRNVFW VDAKARLDYG YFDDVIIFDT TYIKSEYKLP FAPFIGVNHH FQCLLLGCAL 360 VADETKSTYV WLMRAWLRAM GGLAPRVILT DQDKSLEQAI AEVFPNSHHC FCLWHLLSKI 420 PEKLGNVIRQ HENFMTKFNK CIFKSWTNEQ FEKRWWKMAE RFNLRNDLWF QSLYEDRQKW 480 MPMYMRDKFL AGMSTTQRSD SISSFFDKHM QRKTTLKEFL EQYKAILQGK FEEEAKADFE 540 SWHKQPGLKS PSPFGKQMAT LYTHAIFKKF QVEVLGVVAC HPRKDNEDGE TKTFKVQDFE 600 ENEDFIVVWK GTSSYFSCSC RSFEFNGFLC RHVLIVMQMS GVHSIPSQYI LKRWTKDAKS 660 RETSREQSGK VESRVQRYND LCRRAFKLGD EGSLSLESYN IAFSALEDAL RKCENVNNSI 720 HCVIEPNSPS PGRPHDYEEA NHATGVSKTN KKDSISRKKQ VHSEPDVMSV GMHESWQQLE 780 QLNSRAPNLD GYFGPQQIVQ GMGQLNSIAS SRDDYYSNEH SMQRLGQLNA IASIHEAHFI 840 TQQRIQGMGQ LHCRSETIPS CFDTHDGLQE MDQSNVGPSQ LHSMVTKNLH PKRLSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G15090.1 | 0.0 | FAR1 family protein |