PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673395.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 538aa MW: 59002.2 Da PI: 5.8366

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	355	397	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_021673395.1 355 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 397 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MLSGLNGSVW TEDKEAQKST ANNNNISNSC DVMESKEEMG SLSTFKSMLE VEEDWYVTNS 60 TIHNHQDTIR DITFSPNLTD PDNLLLHPVD SSSSCSPNSS VFNNLDPSQV HYFMHSKPTL 120 SSLLNVVSNP LEHDFDLGEI GFLENQATTT TTTNASPLLN RGGGVLGNYT DLSPNNLLST 180 SNLCSDPLFS TTRTLQLPES GSGFTGFRAF VENSGNTLFL NRSKLLRPLE TFPSMGAQPT 240 LFQKRAALRK NLTDNGSNLG VLSGIEIDKG KREMTQLGEE NEKKRKLGNL DDTVEDVSID 300 GSGLNYDSDE LTENIKMEEI GKNGGNSSNA NSSVTGGGVG DQRGKKKGLP AKNLMAERRR 360 RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQR INDLHNELES TPPGSSLTPT 420 SFHPLTPTPS TLPSRIKDKL CPSSLPSPNS QPARVEVRVR DGRAVNIHMF CSRRPGLLLS 480 TMRALDNLGL DIQQAVISCF NGFAMDIFRA EQSREGQDVH PEQIKAVLLD SAGFHGII

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MLSGLNGSVW TEDKEAQKST ANNNNISNSC DVMESKEEMG SLSTFKSMLE VEEDWYVTNS  60
TIHNHQDTIR DITFSPNLTD PDNLLLHPVD SSSSCSPNSS VFNNLDPSQV HYFMHSKPTL  120
SSLLNVVSNP LEHDFDLGEI GFLENQATTT TTTNASPLLN RGGGVLGNYT DLSPNNLLST  180
SNLCSDPLFS TTRTLQLPES GSGFTGFRAF VENSGNTLFL NRSKLLRPLE TFPSMGAQPT  240
LFQKRAALRK NLTDNGSNLG VLSGIEIDKG KREMTQLGEE NEKKRKLGNL DDTVEDVSID  300
GSGLNYDSDE LTENIKMEEI GKNGGNSSNA NSSVTGGGVG DQRGKKKGLP AKNLMAERRR  360
RKKLNDRLYM LRSVVPKISK MDRASILGDA IEYLKELLQR INDLHNELES TPPGSSLTPT  420
SFHPLTPTPS TLPSRIKDKL CPSSLPSPNS QPARVEVRVR DGRAVNIHMF CSRRPGLLLS  480
TMRALDNLGL DIQQAVISCF NGFAMDIFRA EQSREGQDVH PEQIKAVLLD SAGFHGII

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	345	363	KKKGLPAKNLMAERRRRKK
2	357	364	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-114	bHLH family protein