PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673394.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 857aa    MW: 95565.3 Da    PI: 6.485
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.89.8e-24160261199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_021673394.1 160 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 251
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_021673394.1 252 GELRVGVRRA 261
                     99*****996 PP
2Auxin_resp121.37.1e-40286368183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st+++F+v+Y+Pr+s++eF+v+v+++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_021673394.1 286 AWHAISTGTMFTVYYKPRTSPAEFIVPVDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRESKWRCLK 368
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 857 aa     Download sequence    
MDSSEISIKG NGGNVRGDSF SSGYSEPNDP RNAMEGQKSH STRTVSARDA ETALYTELWH  60
ACAGPLVTVP REGERVFYFP QGHIEQVAAS TNQVADQQMP VYDLPSKILC TVINVQLKAE  120
PDTDEVFAQV TLLPEPNQDE SAVDKEPPLP PPPRFHVHSF CKTLTASDTS THGGFSVLRR  180
HADECLPPLD MSRQPPTQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA  240
GDAFIFLRGE NGELRVGVRR AMRQQGNVPS SVISSVSMHL GVLATAWHAI STGTMFTVYY  300
KPRTSPAEFI VPVDRYMESV KNNYSIGMRF KMRFEGEEAP EQRFTGTIVG IEDADPKRWR  360
ESKWRCLKVR WDETSTMPRP ERVSPWSIEP ALAPPALNPL PVPRPKRPRS HMVPSSPDSS  420
VLTREGSSKV TVDPPTPSGY ARVLQGQEFS TLRGNFAESN ESNTAEKSLM WPSSIDEEKI  480
DVISASRRHG SESWMTSGRQ EPTYTDLLSG FGTRADSSHG FGVPFVDQTA AAASRELALD  540
QEGKINSLAS PWSLMSSGLS LRLSESNMKA PVEGRDMPFQ ARGNIRCSAF NEYPMLNGHR  600
VEQSHGNWLM PPPPPSHFHN NAHARERVSK PILVQEHETV TSTDGKCKLF GIPLFSNPVT  660
LEPAASHRNT VNEPISTHPQ SQQLRVMECD QRSEQSKGSK LADDNEHEKQ VQAGALHTRD  720
NQGKVQNVST RSCTKVHKQG IALGRSVDLT KFNNYDELIA ELDRLFEFDG ELMAPKKNWL  780
IVYTDDEGDM MLVGDDPWQE FVGMVRKIFI YTREEVQKMN PGTLNSKGDE NLLDVEGVDA  840
KEVKCLPLPP AHGTENC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein