PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673172.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 398aa MW: 44760.6 Da PI: 6.5039

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+k+++++l++ e ik+vdiyk++PwdLp+ ++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+ XP_021673172.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLPI-ELIKQVDIYKYDPWDLPRLATSGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPICSS 107 579*************************.89***********8888899***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_021673172.1 108 dGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEEKNDVGKI DEVMLPGFRF HPTDEELVGF YLKRKIQQRP LPIELIKQVD IYKYDPWDLP 60 RLATSGEKEW YFYCPRDRKY RNSARPNRVT RAGFWKATGT DRPICSSDGT KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPSPAEPSPP KKLLEKSLPP NDAWAICRIF KKTNSMAQKA 180 LNYSWISQLP DATASDMLNQ GPHCTQFSSE NISCTTEIGS LFPICSNDLQ QASSGNFSAL 240 DISSYKPITN TVDKPSLFPV SNGDLPNNFM FSPIEMSAPT KCTVDAPSIL LNHALIGDVN 300 KDSECIDYEG SQHQFTGFSI CLPQVTQVNM GAEEDEAGLR NNPSEIHDNS QWGTMRSIGF 360 PFSLPSNLPD AWKSNLSWDS PPCPSEMSSN YSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEEKNDVGKI DEVMLPGFRF HPTDEELVGF YLKRKIQQRP LPIELIKQVD IYKYDPWDLP  60
RLATSGEKEW YFYCPRDRKY RNSARPNRVT RAGFWKATGT DRPICSSDGT KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPSPAEPSPP KKLLEKSLPP NDAWAICRIF KKTNSMAQKA  180
LNYSWISQLP DATASDMLNQ GPHCTQFSSE NISCTTEIGS LFPICSNDLQ QASSGNFSAL  240
DISSYKPITN TVDKPSLFPV SNGDLPNNFM FSPIEMSAPT KCTVDAPSIL LNHALIGDVN  300
KDSECIDYEG SQHQFTGFSI CLPQVTQVNM GAEEDEAGLR NNPSEIHDNS QWGTMRSIGF  360
PFSLPSNLPD AWKSNLSWDS PPCPSEMSSN YSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	2e-98	NAC family protein