PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673088.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 636aa MW: 69026.5 Da PI: 6.1126

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	9e-31	352	410	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_021673088.1 352 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDQTILITTYEGNHNHP 410 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MAKGRSCGLS IDSDLITSTF FIHKPTVLNS FPEENFKNPN CNNLTLMDAS ASRSPPPTIQ 60 FPVNLNSTTH DHEDDDDDVS LPSDDNKRKV IDEMDFFAEK EHDEVKPSNN LTHGFKELKS 120 PTRLEFDVNT GLNLLTTNTS SDQSLVDDGI SSNMEEKRAK SELAVLQAEL ERMKVENLRL 180 RDMLNQVTSN YNSLQMHLVT IMQDQKPRES NQEHVQDGLD RKLEDNKKHS GNGVVVPRQF 240 MDLGPATAAT IGGGGDTDEL SLSSSEGRSR DRSRSPGNNE ENRNNNEDGM VFDQDKKRNI 300 GREDSPDQGS QGWGPNKIAR FNSTKSNVDQ TEATIRKARV SVRARSEAPM ITDGCQWRKY 360 GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDQTILI TTYEGNHNHP LPPAAMAMAS 420 TTSSAARMLL SGSMSSADGI MNPNFLTRTL LPCSSSMATI SASAPFPTVT LDLTQNPNPL 480 QFQRQPSQFQ VPFPNLPQNF ANSSAAAALL PQIFGQAFYN QSKFSGLQMS QDVEGKNKLG 540 HQSQVAAAAA IHQQQGQQNS LTDTVTAATA AIAADPNFTA ALAAAITSII GGGGAQPSNI 600 TSSSTTSSTN LITISNTSGS ISTTISNTNG NNKINN

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MAKGRSCGLS IDSDLITSTF FIHKPTVLNS FPEENFKNPN CNNLTLMDAS ASRSPPPTIQ  60
FPVNLNSTTH DHEDDDDDVS LPSDDNKRKV IDEMDFFAEK EHDEVKPSNN LTHGFKELKS  120
PTRLEFDVNT GLNLLTTNTS SDQSLVDDGI SSNMEEKRAK SELAVLQAEL ERMKVENLRL  180
RDMLNQVTSN YNSLQMHLVT IMQDQKPRES NQEHVQDGLD RKLEDNKKHS GNGVVVPRQF  240
MDLGPATAAT IGGGGDTDEL SLSSSEGRSR DRSRSPGNNE ENRNNNEDGM VFDQDKKRNI  300
GREDSPDQGS QGWGPNKIAR FNSTKSNVDQ TEATIRKARV SVRARSEAPM ITDGCQWRKY  360
GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDQTILI TTYEGNHNHP LPPAAMAMAS  420
TTSSAARMLL SGSMSSADGI MNPNFLTRTL LPCSSSMATI SASAPFPTVT LDLTQNPNPL  480
QFQRQPSQFQ VPFPNLPQNF ANSSAAAALL PQIFGQAFYN QSKFSGLQMS QDVEGKNKLG  540
HQSQVAAAAA IHQQQGQQNS LTDTVTAATA AIAADPNFTA ALAAAITSII GGGGAQPSNI  600
TSSSTTSSTN LITISNTSGS ISTTISNTNG NNKINN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-105	WRKY family protein