PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021673057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | CO-like | ||||||||
Protein Properties | Length: 428aa MW: 46732.8 Da PI: 8.5303 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 18.6 | 3.8e-06 | 12 | 43 | 4 | 35 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++++ + l+C+ ++ lC C ++ H+ XP_021673057.1 12 VSCDFCSDQVAVLYCRADSAKLCLFCDQHVHS 43 57**************************9995 PP | |||||||
2 | zf-B_box | 24.7 | 4.9e-08 | 54 | 99 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+++++++++ Ce+++ lC++C H + H+++p+ XP_021673057.1 54 SQICDNCSSEPVSVRCETDNLVLCRECDWDAHGScsvsasHDRTPI 99 689*************************999954888999988876 PP | |||||||
3 | CCT | 63.6 | 5.8e-22 | 380 | 423 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++ XP_021673057.1 380 RGTAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAS 423 6789*************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 428 aa Download sequence |
MGSPKSDTKR TVSCDFCSDQ VAVLYCRADS AKLCLFCDQH VHSANLLSRK HFRSQICDNC 60 SSEPVSVRCE TDNLVLCREC DWDAHGSCSV SASHDRTPIE GFSGCPSALE LASIWGFDLQ 120 EKKLDKESSV PLIQSWSGCG VQDMLMQIEP WVCRSSGGVS YMDSMVPNDR AMVYGNGSNV 180 EMVTMSKRKQ IPSCGKYKQV IFKQLMGLLK RNMITGDGGG GENLMPETPS RNGWHGNVEA 240 PDFVNGNDGV TAANGASSTV PQQPLQEQAP FTSFIMLPSP MDLKPSGRVV GDNIMWGGNA 300 SAQGTQNNSN NPTASQGPAT SESNNLPIAR HSSGSTFGKL KSCSGGKDVQ FMEQKILVRG 360 DSVRTMPATE VDTELLAKNR GTAMQRYKEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV 420 KASAAPDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33500.2 | 1e-104 | CO-like family protein |