PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673013.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 482aa MW: 55372.7 Da PI: 5.5255

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.4	5.2e-30	35	119	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r++ lk+plW+evs+k++e g++rs+k+Ckek+en+ k+++++keg+++++++ +t+++f+qlea XP_021673013.1 35 RWPQQETLALLTIRSDMDAAFREAGLKAPLWDEVSRKLSELGYNRSAKKCKEKFENIYKYHRRTKEGRSGKSNG--KTYRFFEQLEA 119 8******************************************************************97554..46*****85 PP
2	trihelix	104.1	1e-32	316	400	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+e+ aLi++r+ ++ +++++ k+plWee+s++m++ g++r++k+Ckekwen+nk++k+++e++kkr +++s+tcpyf+ql+ XP_021673013.1 316 RWPKEEIEALIRLRTTLDMQYQENGPKGPLWEEISAAMKKLGYNRNAKRCKEKWENMNKYFKRVRESNKKR-PDDSKTCPYFHQLD 400 8*******************************************************************8.99********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MEISTIPENS GAAAGNRGNE EGRGEEGDKY LIGSRWPQQE TLALLTIRSD MDAAFREAGL 60 KAPLWDEVSR KLSELGYNRS AKKCKEKFEN IYKYHRRTKE GRSGKSNGKT YRFFEQLEAL 120 DNSHVLLSSP SPDKVHTSMA ADSVNPVNVN TNILPNSIQS PCINFAENPS TSTTSTSSEE 180 SEGTRKKKRK LTDFFERLMK EVIEKQENLQ RKFLDAIEKC EKDRVAREEA WKMQELERIK 240 RERELLMQER SIAAAKDAAV LSFLQKFSEQ ASSVQLSENQ VHPVQLSENE VAPVEKVVKA 300 QENNNLENFA HMSSSRWPKE EIEALIRLRT TLDMQYQENG PKGPLWEEIS AAMKKLGYNR 360 NAKRCKEKWE NMNKYFKRVR ESNKKRPDDS KTCPYFHQLD VLYNKKTRKV DNSVNSGHEL 420 KPEEILMHMV DSQEERQQQE SATTEDGESE NVDQNQEGDR ENDDEDAYQI VANDPSAVAM 480 ME

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MEISTIPENS GAAAGNRGNE EGRGEEGDKY LIGSRWPQQE TLALLTIRSD MDAAFREAGL  60
KAPLWDEVSR KLSELGYNRS AKKCKEKFEN IYKYHRRTKE GRSGKSNGKT YRFFEQLEAL  120
DNSHVLLSSP SPDKVHTSMA ADSVNPVNVN TNILPNSIQS PCINFAENPS TSTTSTSSEE  180
SEGTRKKKRK LTDFFERLMK EVIEKQENLQ RKFLDAIEKC EKDRVAREEA WKMQELERIK  240
RERELLMQER SIAAAKDAAV LSFLQKFSEQ ASSVQLSENQ VHPVQLSENE VAPVEKVVKA  300
QENNNLENFA HMSSSRWPKE EIEALIRLRT TLDMQYQENG PKGPLWEEIS AAMKKLGYNR  360
NAKRCKEKWE NMNKYFKRVR ESNKKRPDDS KTCPYFHQLD VLYNKKTRKV DNSVNSGHEL  420
KPEEILMHMV DSQEERQQQE SATTEDGESE NVDQNQEGDR ENDDEDAYQI VANDPSAVAM  480
ME

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	191	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-126	Trihelix family protein