PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021672519.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 316aa    MW: 35531.8 Da    PI: 8.572
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021672519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH44.62.4e-14242267126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     +ktelC+ +++t tC+yGd C+FaHg
  XP_021672519.1 242 WKTELCNKWQETSTCPYGDHCQFAHG 267
                     8************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEKSVSPPSD LKTVSPPSKS PPLASPRTSD HLHTQQFASN FTTLYHSIFP PKPSPLPSSI  60
SFSLTPSTSS PSSTATTNDF NTEHRLHQAR LILEYQELCD HYELSVARLQ VLTNEIDSLS  120
QENADLRFTN NELVKILSLS SQAAIQSRFT SREMVEPNRF ERNTERVSLP KSISVRSSGY  180
LKTNRASASN GGGQSSTSNR PRVPSHLDQF VPGSAQHRVC VPGRGKKEDA AVELDVYNQG  240
MWKTELCNKW QETSTCPYGD HCQFAHGITE LRPVIRHPRY KTQLCRMVLA GEVCPYDHRC  300
HFRHSLTEQE RLMGPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.12e-78C3H family protein