PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 563aa MW: 64655.2 Da PI: 9.179 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 27.6 | 5.1e-09 | 539 | 562 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++lC+f+a+ G C yGd+CkF H+p XP_021672450.1 539 QKLCKFYAQ-GRCYYGDNCKFLHDP 562 579******.*************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MAIFEQQKPQ YHQDLEEEEE DYYNEGGESD AEYDSDMDPS YCVLEESTRG KLAKLSIKKK 60 SKFRIGKNLE MDVDVEIDPE EAEMNVGEID EKSFKQVQEI IEAGKLEKLK VEQCKVYLRK 120 NGLRLTGNKD TLIQRIKEHQ EILNGGEKKY PVSSFVLDCK GDACTGDVVM FEQNVYELYD 180 IASRSARGPP CGTRIVAGRI VKESYGAVKQ QHTFTIEVLW SKGEKPLCPL HPLLIKGRNL 240 YRLKTLRQRW ENEEERRKIL IEKHSRGSLA RCARETRIQE KERRKVLREN RALTKEERNR 300 NQSQLYANLT ANQEIHAQQS GSSINLGKAA PEPRLLGSSV DSRKMSIQLH SKMGGGAQKL 360 IQPHHSGSSI LPVKVGNGTQ QLAILPQPWG SFANREKMEG RHLQPAAQPQ RSGSSIDMLK 420 MGNRPLRLGI QPQQSDILAD SLKQTNRPPQ RSGFSFETGK LPFQPKLQKH HRENDNSHRV 480 PHNLVDYRGI QEVEQHNCDK VGSWLSNFYT NDDHHRQPLR SMKHYQAMDP VNRNGYLQQK 540 LCKFYAQGRC YYGDNCKFLH DPR |