PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672449.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C3H

Protein Properties

Length: 564aa MW: 64605.1 Da PI: 9.1745

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	27.6	5.2e-09	540	563	3	27
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++lC+f+a+ G C yGd+CkF H+p XP_021672449.1 540 QKLCKFYAQ-GRCYYGDNCKFLHDP 563 579****.***********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MAIFEQQKPQ YHQDLEEEEE DYYNEGGESD AEYDSDMDPS YCVLEESTRG KLAKLSIKKK 60 SKFRIGKNLE MDVDVEIDPE EAEMNVGEID EKSFKQVQEI IEAGKLEKLK VEQCKVYLRK 120 NGLRLTGNKD TLIQRIKEHQ EILNGGEKKY PVSSFVLDCK GDACTGDVVM FEQNVYELYD 180 IASRSARGPP CGTRIVAGRI VKESYGAVKQ QHTFTIEVLW SKGKKPLCPL HPLLIKGRNL 240 YRLKTLRQRW ENEEERRKIL IEKHSRGSLA RCARETRIQE KERRKVLREN RALTKEEKNR 300 NQSQLYANLT ANEEIHAQQS GSSINLGKAA PEPRLLGSSV DSRKMSIQSH SKMGGGAQKL 360 IPPHHSGSSI LPVKVGNGTQ QLAILPQPWG SFANREKMEG GRHLQPAAQP QRSGSSIDML 420 KMGNRPLRLG IQPQQSDILA DSLKQTNRPP QRSGFSFETG KLPFQPKLQK DHRENDNSHR 480 VPHNLVDYRG IQEVEQHNCD KVGSWLSNFY TNDDHHRQPL RSMKHYQAMD PVNRNGYLQQ 540 KLCKFYAQGR CYYGDNCKFL HDPR

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MAIFEQQKPQ YHQDLEEEEE DYYNEGGESD AEYDSDMDPS YCVLEESTRG KLAKLSIKKK  60
SKFRIGKNLE MDVDVEIDPE EAEMNVGEID EKSFKQVQEI IEAGKLEKLK VEQCKVYLRK  120
NGLRLTGNKD TLIQRIKEHQ EILNGGEKKY PVSSFVLDCK GDACTGDVVM FEQNVYELYD  180
IASRSARGPP CGTRIVAGRI VKESYGAVKQ QHTFTIEVLW SKGKKPLCPL HPLLIKGRNL  240
YRLKTLRQRW ENEEERRKIL IEKHSRGSLA RCARETRIQE KERRKVLREN RALTKEEKNR  300
NQSQLYANLT ANEEIHAQQS GSSINLGKAA PEPRLLGSSV DSRKMSIQSH SKMGGGAQKL  360
IPPHHSGSSI LPVKVGNGTQ QLAILPQPWG SFANREKMEG GRHLQPAAQP QRSGSSIDML  420
KMGNRPLRLG IQPQQSDILA DSLKQTNRPP QRSGFSFETG KLPFQPKLQK DHRENDNSHR  480
VPHNLVDYRG IQEVEQHNCD KVGSWLSNFY TNDDHHRQPL RSMKHYQAMD PVNRNGYLQQ  540
KLCKFYAQGR CYYGDNCKFL HDPR