PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671887.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 804aa MW: 88435.7 Da PI: 5.985

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.3e-19	283	383	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +gr+W++++++ +++s++yvl+ G ++ +L++gD+++F+ +++ +++ XP_021671887.1 283 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGREWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTITFS-QKDPGGK 375 99************************555556677***********99899999999.*******************.4559999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021671887.1 376 LVIGFRKA 383 99999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MEEGLAFAIW WICLSLLYLR RLHCGCIASS SLLEILDFGG IGCTSCTRSS QLHSIHSYDI 60 SNCFGSSTTN NAGDLESFPP ENQVAASTLN EGKLAQLCRL MEANEPNLLC QSEGPDKNAS 120 LGQFRQEEIV QIIGEAGIGF SDASQSSVGE SKFANPDTIR SILEMKDMHG SLAPSLSMTL 180 GAPSGTTSFV PYPCGVVEGR DKSKTPPFQQ GQSSRPILPK PSKPGPAGSS KTSKAVVPEL 240 RIARPPAEGQ GKNQLLPRYW PRITDQELQK LSGDLNSNIV PLFEKVLSAS DAGRIGRLVL 300 PKACAEAYFP PISQSEGLPL RIQDVKGREW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ 360 AGDTITFSQK DPGGKLVIGF RKARNNSDMQ EAQTTALPIG TASTETSFSA VGDIGWNKGG 420 SHGGTINGDA QSLAMAEKKR TRNIGPKSKR LLMHSEDALE LRLTWEEAQD LLRPPPNVKP 480 SIVTIEDHEL EEYDEPPVFG KRTIFTDRSS WGQEQWAQCD DCSKWRKLPE DALLPPKWTC 540 SDNVCDSSRC SCSAPEEMSP KDLDNLLRVS KDFKKRRILE RHKPSPDREL SGLDALASAA 600 VLGDNIGDSD EPLVGATTKH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT 660 LMLRKKKRQS EREAEISQGN NDRKDESEMI STLSDALLTV NNSENEVGPN KKQTEVAETS 720 AGQIDLNCHP NREEMQVDVP GLSMMNIDEP FDNYIKQNGL ANLMCERQSS FASCLHSQTN 780 GENLRRLSDE AYPEDSMDSN PRGD

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MEEGLAFAIW WICLSLLYLR RLHCGCIASS SLLEILDFGG IGCTSCTRSS QLHSIHSYDI  60
SNCFGSSTTN NAGDLESFPP ENQVAASTLN EGKLAQLCRL MEANEPNLLC QSEGPDKNAS  120
LGQFRQEEIV QIIGEAGIGF SDASQSSVGE SKFANPDTIR SILEMKDMHG SLAPSLSMTL  180
GAPSGTTSFV PYPCGVVEGR DKSKTPPFQQ GQSSRPILPK PSKPGPAGSS KTSKAVVPEL  240
RIARPPAEGQ GKNQLLPRYW PRITDQELQK LSGDLNSNIV PLFEKVLSAS DAGRIGRLVL  300
PKACAEAYFP PISQSEGLPL RIQDVKGREW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ  360
AGDTITFSQK DPGGKLVIGF RKARNNSDMQ EAQTTALPIG TASTETSFSA VGDIGWNKGG  420
SHGGTINGDA QSLAMAEKKR TRNIGPKSKR LLMHSEDALE LRLTWEEAQD LLRPPPNVKP  480
SIVTIEDHEL EEYDEPPVFG KRTIFTDRSS WGQEQWAQCD DCSKWRKLPE DALLPPKWTC  540
SDNVCDSSRC SCSAPEEMSP KDLDNLLRVS KDFKKRRILE RHKPSPDREL SGLDALASAA  600
VLGDNIGDSD EPLVGATTKH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT  660
LMLRKKKRQS EREAEISQGN NDRKDESEMI STLSDALLTV NNSENEVGPN KKQTEVAETS  720
AGQIDLNCHP NREEMQVDVP GLSMMNIDEP FDNYIKQNGL ANLMCERQSS FASCLHSQTN  780
GENLRRLSDE AYPEDSMDSN PRGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	655	666	KRRFKTLMLRKK
2	655	668	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein