PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021671684.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 751aa    MW: 83197.9 Da    PI: 6.3334
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021671684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.48e-2155111157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     ++k  ++t++q++eLe +F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k+
  XP_021671684.1  55 KKKYNRHTPHQIQELEIFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKN 111
                     789999************************************************995 PP
2START1879.9e-592604832206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la++a++el+k a+ ++p+W ks     + +n++e++++f++  +     + +ea r++g+v+ ++  lve+l+d++ +W e ++    +a+t++
  XP_021671684.1 260 LALAAMDELIKIAQIDSPLWIKSLeggkDALNYEEYMRTFSPCIGvkpssFVTEATRETGIVIINSLALVETLMDVN-RWVEAFPgliaRASTID 353
                     6899*************************************99889***99**************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      galq+m+ae+q+ sp vp R + f+R+++q+ +g+w++vdvS+d +q+ + s +++ ++++pSg+++++++ng skvtwveh  
  XP_021671684.1 354 VISSGmggtknGALQVMQAEFQVVSPFVPvRQVRFLRFCKQHAEGVWAVVDVSIDANQESSISFPFADCRRFPSGCIMQDMPNGCSKVTWVEHSQ 448
                     ************************************************************99********************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++ +h+l+rs+++sg+ +ga +w+atlqr+ce+
  XP_021671684.1 449 YDESAVHQLYRSVLSSGRGFGAHRWLATLQRYCEC 483
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 751 aa     Download sequence    
MDTHGDMGLL GEHLDPIIVG RIKEDGYESR SGSDNNLEGA SGDDQGAGED QRCRKKKYNR  60
HTPHQIQELE IFFKECPHPD EKQRSELSRR LGLESKQIKF WFQNRRTQMK NQLERQENII  120
LRQENEKLRA ENELLKQNMT DPICNNCGSP VVPGPVSYEQ QQLRIENGRL KDELGRVCAL  180
ANKFLGRPLS SSFCPIPPFG SNSKLDLSVG RSGYGGICNV ETTLPFGLDY GGGFTMPLMK  240
PTTSPMLNEV PYDRSMFIDL ALAAMDELIK IAQIDSPLWI KSLEGGKDAL NYEEYMRTFS  300
PCIGVKPSSF VTEATRETGI VIINSLALVE TLMDVNRWVE AFPGLIARAS TIDVISSGMG  360
GTKNGALQVM QAEFQVVSPF VPVRQVRFLR FCKQHAEGVW AVVDVSIDAN QESSISFPFA  420
DCRRFPSGCI MQDMPNGCSK VTWVEHSQYD ESAVHQLYRS VLSSGRGFGA HRWLATLQRY  480
CECTSVLMSP TISGDDQTVI NISGKKSMVK LAQRMVDNFC SGVCASSLHK WDKLLVGNVS  540
EDIRILTRKN INEPGKPPGI VLSAATSVWL PVMRERLFDF LRDERSRSEW DILSHGGMMQ  600
EMVHISKGHC RGNCVSLLRS SAVCPNANES SMIILQETWN DASSSLVVYA PIDIASMTLV  660
MNGGDSNYVA LLPSGFVILS DDPISQGGAN FCNGTLIKRD SDGGDGGGSL LTVGFQILVN  720
NLRTAKLTLE SVETVNSLIS RTIQRIKQCF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein