PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671437.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TALE

Protein Properties

Length: 450aa MW: 50123.3 Da PI: 6.0236

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	388	420	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_021671437.1 388 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 420 69*****************************87 PP
2	ELK	26.8	1.2e-09	341	362	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh L+++Y++++ ++++E++ XP_021671437.1 341 ELKHDLKQGYKEKIADIREEIL 362 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MAFHQNLSQE LPLHHFSAEQ TQPPQTQQQQ QQQQNIPEST TAPNWLNTAL LRTQQPQPPS 60 SHSHFTSNNN FLNLHTTTST TNSDSTASQN PTQWLSRSSS LLNRNHSDVI DDVTVATAAD 120 SIIAGNISHE SADLKTNTNN NGETMNNKSE GGMVESDGGG SGGGEGVVNW QNARYKAEIL 180 SHPLYDQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVA KYSALGGGTQ GMVVDDKELD 240 QFMTHYFLLL CSFKEQLQQH VRIHAMEAVM ACWEIEQSLQ SLTGVSPGEG TGATMSDDDE 300 DQVDSDANLF DTSLDGSDTM GFGPLIPTES ERSLMERVRH ELKHDLKQGY KEKIADIREE 360 ILRKRRAGKL PGDTTSVLKS WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR 420 NWHSNPSTST VLKSKRKRSN AGDNGGDRFM

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MAFHQNLSQE LPLHHFSAEQ TQPPQTQQQQ QQQQNIPEST TAPNWLNTAL LRTQQPQPPS  60
SHSHFTSNNN FLNLHTTTST TNSDSTASQN PTQWLSRSSS LLNRNHSDVI DDVTVATAAD  120
SIIAGNISHE SADLKTNTNN NGETMNNKSE GGMVESDGGG SGGGEGVVNW QNARYKAEIL  180
SHPLYDQLLS AHVACLRIAT PVDQLPRIDA QLAQSQHVVA KYSALGGGTQ GMVVDDKELD  240
QFMTHYFLLL CSFKEQLQQH VRIHAMEAVM ACWEIEQSLQ SLTGVSPGEG TGATMSDDDE  300
DQVDSDANLF DTSLDGSDTM GFGPLIPTES ERSLMERVRH ELKHDLKQGY KEKIADIREE  360
ILRKRRAGKL PGDTTSVLKS WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR  420
NWHSNPSTST VLKSKRKRSN AGDNGGDRFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	418	438	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-177	TALE family protein