PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021671175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 418aa MW: 47439.7 Da PI: 9.4058 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.9 | 2e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_021671175.1 13 RGLWSPEEDEKLIKFITTYGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ ++d ++ lG++ W+ Ia++++ gRt++++k++w++ XP_021671175.1 66 RGSFTAQEEMTIIDIHRILGNR-WAQIAKHLP-GRTDNEIKNFWNS 109 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MGHQCCSKQK VKRGLWSPEE DEKLIKFITT YGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT AQEEMTIIDI HRILGNRWAQ IAKHLPGRTD NEIKNFWNSC IKKKLIAQGL 120 DPNTHKLLSP SYKQNCNNNT PYGLSADSHY QPILSSSVSS AVSPQMKDFS MDVKKTPFNL 180 SFLSIPPPDA NSSCLHPLHI SSTCEQQNSN MQTFLDCASQ SISKRSVTIS CSNSNPFGFG 240 VIEDRSLWSG DIEPIQSSRN EEVPAEQVAE IEKTNEHMST GQNLCSTETE TRTRGNAETD 300 TGKRHFKKHS KRKRGETCKY KKYRNAFPAT ETRFRFSIFS ETARKRFRAV SVRFLVGNVS 360 DTGKRHSVPF PCFIGRNMVA SFQSSHFDFD FAECTLMPEM YYTASPVDQL TWTLQALQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 343 | 349 | ARKRFRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 2e-81 | MYB family protein |