PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021670867.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 319aa    MW: 36452.9 Da    PI: 4.7184
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021670867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_021670867.1 14 KGPWTAEEDKKLINFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding47.25.2e-1568111247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      g  ++ E++  +d+++qlG++ W++Ia++++ gRt++++k+ w+++
   XP_021670867.1  68 GFLSEHEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNNWNTH 111
                      56699****************.*********.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL NNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGFL SEHEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNNWNT HIKKKLRKMG  120
IDPLTHKPFP TSEPPPPPPP QEQQEVQEQQ QAQSYSTNAM AELEQNKETE TSVQPSTTEE  180
TKVEEEKRMT STFETMEPMN YGFCIDDVPL IEPHEMLVPC TAAPSSSSST ITTSSSSSSS  240
HGPYNNLFLE GFQFADFEWP DNDIDWWVDD LSSCLDLLIN DVDSDRKQVD ALDDHYPHPP  300
INQYPEMVLD QDSWTYGIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.13e-91MYB family protein