PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021670715.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 370aa MW: 40990.7 Da PI: 8.9101

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021670715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.5	1.8e-32	49	186	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ ++ +++ ++s++ + XP_021670715.1 49 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPMQPVNFGRNHQAILTSSHELDAsqskkegf 143 689*************************************************************6666644433333332222211111111133 PP TCP 89 ..........................kaaksaakskksqksaasalnlakesrakarararertrekmr 131 k ak+++ ar++ +ek + XP_021670715.1 144 ktnssinwedpggltrpnfwssdsilK--------------------------AKSKEVARDSVHEKEN 186 333444466666666665543322220..........................2222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MMIASSKEVD SPTKKEGDTS DGKITKASSS STPWLRLKDP RIVRVSRAFG GKDRHSKVCT 60 IRGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKVVDWLLN AAKHEIDELP PLPMQPVNFG 120 RNHQAILTSS HELDASQSKK EGFKTNSSIN WEDPGGLTRP NFWSSDSILK AKSKEVARDS 180 VHEKENWTKR NGQEDDKQES SEGHSSAHQV PSSSFFPRVS HSSLPSLINN TMPYGSFLQL 240 EHTNCPLSRL GSHGFAAQTD DLHNLNAVPL PSTLSLSSGS QILVCPPGTA QPYFPSHVTA 300 ASTEIDPRQT NHFQMLTSST QNLFPNSLAP SPYPMNQSAR PFHFSATPRL FHPHSSGSHQ 360 TDKDQEFPCK

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MMIASSKEVD SPTKKEGDTS DGKITKASSS STPWLRLKDP RIVRVSRAFG GKDRHSKVCT  60
IRGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKVVDWLLN AAKHEIDELP PLPMQPVNFG  120
RNHQAILTSS HELDASQSKK EGFKTNSSIN WEDPGGLTRP NFWSSDSILK AKSKEVARDS  180
VHEKENWTKR NGQEDDKQES SEGHSSAHQV PSSSFFPRVS HSSLPSLINN TMPYGSFLQL  240
EHTNCPLSRL GSHGFAAQTD DLHNLNAVPL PSTLSLSSGS QILVCPPGTA QPYFPSHVTA  300
ASTEIDPRQT NHFQMLTSST QNLFPNSLAP SPYPMNQSAR PFHFSATPRL FHPHSSGSHQ  360
TDKDQEFPCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	7e-50	TCP family protein