PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021670317.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 345aa MW: 37510.6 Da PI: 10.0476 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.2 | 1.3e-31 | 274 | 331 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ XP_021670317.1 274 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLVVTYEGEHNHT 331 99************************988****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 345 aa Download sequence |
MAVELMMAYR NDGFAAKVEE NAVQEAASGL ESVNKLIRLL SHQNQENLQS SSSSPSSRPS 60 VDIGMDCKAV ADVAVSKFKR VISLLGRTRT GHARFRRAPV ATPVNNTQIS LENQVLESKV 120 YYAMPIQLPP PPPPPPPPPP VPNHFHDYSS VTMMSKNNGV ISDRKESSTT LNFSYSSAGN 180 SFVSSLTGDT IDSKQLSSSS AFQITNLSQV SSSGKPPLSS SSLKRKCSSE NMGSGKCSGG 240 SSGRCHCSKK RKLRLKRVVR VPAISLKMAD IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS 300 VRGCPARKHV ERALDDPSML VVTYEGEHNH TLSIAETTNL ILESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24240.1 | 3e-62 | WRKY family protein |