PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669938.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 569aa MW: 61066.8 Da PI: 6.6188

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.6e-30	230	289	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_021669938.1 230 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAEDMSILITTYEGTHNHP 289 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDASGAAATV PPLISHKDGC SQEAEIKVGL RGIRGELLQD HGVKPSSSNN EDKEEDVLEA 60 AKAEMGEVRE ENERLKMMLQ QVEKDYQSLK LRFLDILRKE TCKKSADSGP SSDETEEPEL 120 VSLCLGRTPS EPKRDEKTSN SSKSSRENEE LKASLTLGLD SKFQTSTELV SSNRSPENSS 180 EDLAKEDEAA GETWPPSKIL KRNIDNEVAQ QSNVKRARVC VRARCDTPTM NDGCQWRKYG 240 QKIAKGNPCP RAYYRCTVAP ACPVRKQVQR CAEDMSILIT TYEGTHNHPL PVSATAMAST 300 TSAAASMLLS GSSASQPGLG SNAAATTATE LNGLSFSLYD SSRTKQFYLA NPSSTLFPTI 360 TLDLTASPST SARFSSCFTS TSRFPSTSLN FFSAESNILP AVWGNGYQTN STTLTNLGPS 420 LGLGKQIQEQ MYQPYIEKNH QHQAPSQQAL TETLTKAITC DPSFRTVIAS AISSMMGGSG 480 SGSASASSNQ TGAKSFGQNL KLGEANNEAI SSNSLNPQNG KGCATSYFNG LSASTSQLGS 540 LLQPHALPFS VFNSASMAAN NDNKKDNRS

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDASGAAATV PPLISHKDGC SQEAEIKVGL RGIRGELLQD HGVKPSSSNN EDKEEDVLEA  60
AKAEMGEVRE ENERLKMMLQ QVEKDYQSLK LRFLDILRKE TCKKSADSGP SSDETEEPEL  120
VSLCLGRTPS EPKRDEKTSN SSKSSRENEE LKASLTLGLD SKFQTSTELV SSNRSPENSS  180
EDLAKEDEAA GETWPPSKIL KRNIDNEVAQ QSNVKRARVC VRARCDTPTM NDGCQWRKYG  240
QKIAKGNPCP RAYYRCTVAP ACPVRKQVQR CAEDMSILIT TYEGTHNHPL PVSATAMAST  300
TSAAASMLLS GSSASQPGLG SNAAATTATE LNGLSFSLYD SSRTKQFYLA NPSSTLFPTI  360
TLDLTASPST SARFSSCFTS TSRFPSTSLN FFSAESNILP AVWGNGYQTN STTLTNLGPS  420
LGLGKQIQEQ MYQPYIEKNH QHQAPSQQAL TETLTKAITC DPSFRTVIAS AISSMMGGSG  480
SGSASASSNQ TGAKSFGQNL KLGEANNEAI SSNSLNPQNG KGCATSYFNG LSASTSQLGS  540
LLQPHALPFS VFNSASMAAN NDNKKDNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	9e-78	WRKY family protein