PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669825.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 854aa MW: 98058.9 Da PI: 6.5569

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.6	1e-23	98	184	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e++ + ++r+ +t+Cka +++k+++++kw ++++ eHnHe++p XP_021669825.1 98 SFYREYARSVGFGITIKASRRSKKSGKFIDVKIACSRFGSKRESSAT----VNPRSCIKTDCKAGMHMKRTQEEKWIIYSFIREHNHEICP 184 5***************************************99888....99*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MEIDLELPSN EQEKLNTGSN KSIDVMDSAY GLHVTEEEIY SPTGEYVEEA CRPNENECCT 60 GDGDHVEGNI VRADAVNKGV IIEPQNGLEF ETKEAAYSFY REYARSVGFG ITIKASRRSK 120 KSGKFIDVKI ACSRFGSKRE SSATVNPRSC IKTDCKAGMH MKRTQEEKWI IYSFIREHNH 180 EICPDDFYNS IQGRNKQSGV IACQKKGLQL ALDEDDIQVM LEHFMCMQAQ NHNFFYSLDI 240 DHEKRLRNVF WIDAKGRHDY NFFCDVVFFD TFYVRSKYKV PYAPIIGVNH HFQYILLGCA 300 LIGEQTTSTF IWLMQTWRKA VGGQAPKVII TEQEKCLNEA VSSVFPDTCH CFCLWHILSK 360 MPENLSCVAN EGETFMAKFN KCIYRSWTDE QFEKRWWKLV DKFELQDNEW VHSLFQDRKR 420 WVPTYMQDTF LAGMSTTERY GSIASFFDRY IHRESTFKEF MEQYTIFLED WIEMEAKADF 480 VTQNKQPALR SHSSFEKQML GVYTDAVFKK FQVEVLGAVS CQLQKESEDG ATCNFQVDDF 540 EERHNFLVMW NEAASDIHCS CRSFEYRGFL CKHAILVLQM SGVSNIPSPY ILKRWTKDAK 600 ITQSVSEISN GLPYRVQRFN DLCKRAIKLC EAGSLCEEAY HIAFQALEEV LRSCVSVNNS 660 VRSASEPNSL AVHGFLNIEE ENRSSNMSKS SKKKKIYKKK KVLSEPEGIT VGLQDSYQQL 720 EQINSRAHTT ENCYVPQQDM QDMELGSRAQ TLDGFYGPQH GMQGTGQLNS ISPMRDGYHQ 780 GLPGMGQLHS ILTCVSSYGA QQSMQALGQL GFRVPTVQGC FHIQSNLQDM EQPVGSTQYH 840 RVAPKHLNDK RHSH

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MEIDLELPSN EQEKLNTGSN KSIDVMDSAY GLHVTEEEIY SPTGEYVEEA CRPNENECCT  60
GDGDHVEGNI VRADAVNKGV IIEPQNGLEF ETKEAAYSFY REYARSVGFG ITIKASRRSK  120
KSGKFIDVKI ACSRFGSKRE SSATVNPRSC IKTDCKAGMH MKRTQEEKWI IYSFIREHNH  180
EICPDDFYNS IQGRNKQSGV IACQKKGLQL ALDEDDIQVM LEHFMCMQAQ NHNFFYSLDI  240
DHEKRLRNVF WIDAKGRHDY NFFCDVVFFD TFYVRSKYKV PYAPIIGVNH HFQYILLGCA  300
LIGEQTTSTF IWLMQTWRKA VGGQAPKVII TEQEKCLNEA VSSVFPDTCH CFCLWHILSK  360
MPENLSCVAN EGETFMAKFN KCIYRSWTDE QFEKRWWKLV DKFELQDNEW VHSLFQDRKR  420
WVPTYMQDTF LAGMSTTERY GSIASFFDRY IHRESTFKEF MEQYTIFLED WIEMEAKADF  480
VTQNKQPALR SHSSFEKQML GVYTDAVFKK FQVEVLGAVS CQLQKESEDG ATCNFQVDDF  540
EERHNFLVMW NEAASDIHCS CRSFEYRGFL CKHAILVLQM SGVSNIPSPY ILKRWTKDAK  600
ITQSVSEISN GLPYRVQRFN DLCKRAIKLC EAGSLCEEAY HIAFQALEEV LRSCVSVNNS  660
VRSASEPNSL AVHGFLNIEE ENRSSNMSKS SKKKKIYKKK KVLSEPEGIT VGLQDSYQQL  720
EQINSRAHTT ENCYVPQQDM QDMELGSRAQ TLDGFYGPQH GMQGTGQLNS ISPMRDGYHQ  780
GLPGMGQLHS ILTCVSSYGA QQSMQALGQL GFRVPTVQGC FHIQSNLQDM EQPVGSTQYH  840
RVAPKHLNDK RHSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein