PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669688.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 576aa MW: 64259.3 Da PI: 7.9663

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.2	3.3e-12	57	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g WT+eEd +l + v+++ g+ W++Ia++++ Rt qc rw+ + XP_021669688.1 57 KGHWTEEEDYILTESVRRFHGKKWRKIAECLP-QRTVSQCFTRWNRV 102 789*************99999*****.*********986 PP
2	Myb_DNA-binding	50	7e-16	109	155	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ +++ v+++G++ W+ ar ++ gR +kqc++rw+++l XP_021669688.1 109 KGTWTKEEDDCIIESVRRYGPRKWSVMARSLP-GRLGKQCRERWHNHL 155 799***************************.***********97 PP
3	Myb_DNA-binding	51.4	2.6e-16	161	203	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +WT+eE++ l +++ +G++ W+ Iar ++ gRt++ +k++w+ XP_021669688.1 161 RSSWTEEEELTLTYYHEIYGNK-WTEIARFLP-GRTDNAIKNHWN 203 789*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MMVMKVKEEE ELYDVDSADQ VIDAPPCSVY FGTRGAAFPR SVSFQGRATG PTRRSTKGHW 60 TEEEDYILTE SVRRFHGKKW RKIAECLPQR TVSQCFTRWN RVLNPAIVKG TWTKEEDDCI 120 IESVRRYGPR KWSVMARSLP GRLGKQCRER WHNHLDPAIR RSSWTEEEEL TLTYYHEIYG 180 NKWTEIARFL PGRTDNAIKN HWNCIVKKKL DSNSPAYAED LCKVGSLNFC SCAMKTDSKE 240 VKEERQNPDE LVSVHGRMGL MCSGDMGTAE LLCGLANGGQ NQLEAKYGMV GTSDSSVEID 300 ELMNGIHFDD RGANGCGAMI GCRRNKSSAL EAVLPFPLNS AKSPNRLSGH ELGILHSEFG 360 NETENSYSFT SATGGDRSVI EKESKFHKMN MHVQPVDRNQ RCLHHESAQP KDLVTNLDGA 420 DPSIGHHHVL HANSPFSCST PRNCARYTFV SGNSPESILR NSARTFKNTP SIIRKRAYKE 480 GGLNNSSDVT CTPSWKISCT NATSEDINNA DILNGKQGFL SFFHKPGSSL AVKSLRRQLD 540 YAFDMERDAA AGKCGNSVPA SAAPNIELFA NAMVIP

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MMVMKVKEEE ELYDVDSADQ VIDAPPCSVY FGTRGAAFPR SVSFQGRATG PTRRSTKGHW  60
TEEEDYILTE SVRRFHGKKW RKIAECLPQR TVSQCFTRWN RVLNPAIVKG TWTKEEDDCI  120
IESVRRYGPR KWSVMARSLP GRLGKQCRER WHNHLDPAIR RSSWTEEEEL TLTYYHEIYG  180
NKWTEIARFL PGRTDNAIKN HWNCIVKKKL DSNSPAYAED LCKVGSLNFC SCAMKTDSKE  240
VKEERQNPDE LVSVHGRMGL MCSGDMGTAE LLCGLANGGQ NQLEAKYGMV GTSDSSVEID  300
ELMNGIHFDD RGANGCGAMI GCRRNKSSAL EAVLPFPLNS AKSPNRLSGH ELGILHSEFG  360
NETENSYSFT SATGGDRSVI EKESKFHKMN MHVQPVDRNQ RCLHHESAQP KDLVTNLDGA  420
DPSIGHHHVL HANSPFSCST PRNCARYTFV SGNSPESILR NSARTFKNTP SIIRKRAYKE  480
GGLNNSSDVT CTPSWKISCT NATSEDINNA DILNGKQGFL SFFHKPGSSL AVKSLRRQLD  540
YAFDMERDAA AGKCGNSVPA SAAPNIELFA NAMVIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-72	MYB family protein