PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669614.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 441aa MW: 48430.5 Da PI: 8.5953

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.3	4.2e-16	240	285	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P+a K +Ka++L +++eY+k+Lq XP_021669614.1 240 HNQSERRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 285 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MIGQCIVPKG NLKHQRQEQI EGGESNRSSH VHSHQLQNPT TNLAVPMSNY YEVAELTWEN 60 GQLAMHGLGG LLHSGQATKA TPTWGRTSET LESIVHQATC HDSQQKINSN RQEPAKIASA 120 VESSDGKRAE TSSRRQAQMA PLLMKKRARS ESNQCGSSRD NEQVDRSACA SASPTFCRES 180 DTTMMTYASL ESTPSFKAKT TDNEDSASHG GSENPDEDRE TKTETVRSHS NRRSRAAAIH 240 NQSERRRRDR INQKMKALQK LVPNASKTDK ASMLDEVIEY LKQLQAQVQV MSVRSMPQMM 300 MPLGMQQHFH QMSLLARMGM GVTPLGMGMG MLHDMNSIGH SAAVPHSLPP LLHPAPPAAT 360 ATTTFVPPPP PPHPFVVPSM IPAANPDPAT NSSVALPDPY CSFLAQSMNM ELYNKMAALY 420 RQQVNQRITQ AASQPNHVQG D

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MIGQCIVPKG NLKHQRQEQI EGGESNRSSH VHSHQLQNPT TNLAVPMSNY YEVAELTWEN  60
GQLAMHGLGG LLHSGQATKA TPTWGRTSET LESIVHQATC HDSQQKINSN RQEPAKIASA  120
VESSDGKRAE TSSRRQAQMA PLLMKKRARS ESNQCGSSRD NEQVDRSACA SASPTFCRES  180
DTTMMTYASL ESTPSFKAKT TDNEDSASHG GSENPDEDRE TKTETVRSHS NRRSRAAAIH  240
NQSERRRRDR INQKMKALQK LVPNASKTDK ASMLDEVIEY LKQLQAQVQV MSVRSMPQMM  300
MPLGMQQHFH QMSLLARMGM GVTPLGMGMG MLHDMNSIGH SAAVPHSLPP LLHPAPPAAT  360
ATTTFVPPPP PPHPFVVPSM IPAANPDPAT NSSVALPDPY CSFLAQSMNM ELYNKMAALY  420
RQQVNQRITQ AASQPNHVQG D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	249	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-36	bHLH family protein