PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669288.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TALE

Protein Properties

Length: 355aa MW: 39899.9 Da PI: 5.7412

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	283	317	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_021669288.1 283 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 317 569*****************************885 PP
2	ELK	37.8	4e-13	237	258	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlr YsgyLgsLkqEF+ XP_021669288.1 237 ELKGQLLRRYSGYLGSLKQEFM 258 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEGGSNSTSC MMAFGDNSDG LCPMMMMMPL MTSHHHPPPP PPPPNADSSS NTLFLPLPST 60 NNQHQNRNSG SGSSVLLDEH NHNSNSNTGC YFMDNNDDST ASVKAKIMAH PHYPRLLVAY 120 INCQKVGAPP EVVTGLEEAC ASAAAMGPTG TSCIGEDPTL DQFMEAYCEM LTKYEQELLK 180 PFKEAMLFLQ RVECQFKALT VSSPNSACGE ANERNGSSEE EVDVNNNFID PQAEDQELKG 240 QLLRRYSGYL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES QKLALAESTG 300 LDQKQINNWF INQRKRHWKP SEDMQFVVMD ATHSHYYMDN VLSNPFPMDI SPTFL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEGGSNSTSC MMAFGDNSDG LCPMMMMMPL MTSHHHPPPP PPPPNADSSS NTLFLPLPST  60
NNQHQNRNSG SGSSVLLDEH NHNSNSNTGC YFMDNNDDST ASVKAKIMAH PHYPRLLVAY  120
INCQKVGAPP EVVTGLEEAC ASAAAMGPTG TSCIGEDPTL DQFMEAYCEM LTKYEQELLK  180
PFKEAMLFLQ RVECQFKALT VSSPNSACGE ANERNGSSEE EVDVNNNFID PQAEDQELKG  240
QLLRRYSGYL GSLKQEFMKK RKKGKLPKEA RQQLLDWWSR HYKWPYPSES QKLALAESTG  300
LDQKQINNWF INQRKRHWKP SEDMQFVVMD ATHSHYYMDN VLSNPFPMDI SPTFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	262	LKQEFMKKRK
2	259	263	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-138	TALE family protein