PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669215.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 550aa MW: 63272.7 Da PI: 6.9174

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.8	3.9e-30	124	209	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_021669215.1 124 RWPRQETLTLLEIRSRLDSRFKEANQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 209 8***********************************999*************************98..55667*****85 PP
2	trihelix	63.2	5.7e-20	437	523	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+ e+ Li++ ++++ r+ + g +k++lWee+++km++ g+ rs +Ck+kw n+n ++ +++ +k+++e+ +t yf+ l+ XP_021669215.1 437 RWTEPEIFSLIQIITSVDPRFLEsGHSKAGLWEEIAAKMHSLGYGRSVDECKQKWGNMNIYFNMTATECNKKRKEDLRTSNYFHPLD 523 8******************97478***********************************999999999********886 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MADHQYGVPD LRQLVAGRTH FQGIPLATEP FFLQTRTHGP QIHHFHHDSI IAAAAHSGAE 60 VMLPSGFVQL AHHDHYCTNA STIPSTTTTT TIAIDAASSG AAGSFFGVEM ENGWIGNDAG 120 NYSRWPRQET LTLLEIRSRL DSRFKEANQK GPLWDEVSRI MAEEHGYQRS GKKCREKFEN 180 LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETSNNQTS ASETHLINNS TSFLYQTPTS 240 LTINQENQEG LQENKHSDQS LSFSNTSEFE TSSSENNDDD LSAIAYMMNR SIEKQKGLTE 300 SQSYTRAKKN WKTKVKEFVD LQMRKLLERQ EVWMERILKT IEDREQERMC KEEEWTKQEV 360 ARLDRIHEFW AKERAWIEAR DAALMEALKK HAGKGLELLL PSSTSVDEQI AIATQSHYRN 420 QDRHAKKNGI DEMNTMRWTE PEIFSLIQII TSVDPRFLES GHSKAGLWEE IAAKMHSLGY 480 GRSVDECKQK WGNMNIYFNM TATECNKKRK EDLRTSNYFH PLDPYNDQEM AKLETLNSPS 540 SNSCVSRRLL

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MADHQYGVPD LRQLVAGRTH FQGIPLATEP FFLQTRTHGP QIHHFHHDSI IAAAAHSGAE  60
VMLPSGFVQL AHHDHYCTNA STIPSTTTTT TIAIDAASSG AAGSFFGVEM ENGWIGNDAG  120
NYSRWPRQET LTLLEIRSRL DSRFKEANQK GPLWDEVSRI MAEEHGYQRS GKKCREKFEN  180
LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETSNNQTS ASETHLINNS TSFLYQTPTS  240
LTINQENQEG LQENKHSDQS LSFSNTSEFE TSSSENNDDD LSAIAYMMNR SIEKQKGLTE  300
SQSYTRAKKN WKTKVKEFVD LQMRKLLERQ EVWMERILKT IEDREQERMC KEEEWTKQEV  360
ARLDRIHEFW AKERAWIEAR DAALMEALKK HAGKGLELLL PSSTSVDEQI AIATQSHYRN  420
QDRHAKKNGI DEMNTMRWTE PEIFSLIQII TSVDPRFLES GHSKAGLWEE IAAKMHSLGY  480
GRSVDECKQK WGNMNIYFNM TATECNKKRK EDLRTSNYFH PLDPYNDQEM AKLETLNSPS  540
SNSCVSRRLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-107	Trihelix family protein