PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669102.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 323aa MW: 35484 Da PI: 7.9649

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+++++G+g +W + + + g++R++k+c++rw++yl XP_021669102.1 14 KGPWSPEEDAKLKDYIAKHGTGgNWIALPLKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37	8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ + + G++ W+ Ia+ ++ gRt++++k++w++ XP_021669102.1 69 GDFSDDEDRIICSLYANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIA KHGTGGNWIA LPLKAGLKRC GKSCRLRWLN 60 YLRPNIKHGD FSDDEDRIIC SLYANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 MIYPSEAKLP HQLPASFSSL LHQASSSLPS SPSTVISSSS SSYTLARSVA EPIPFSNPLS 180 SSNNNNFFTT TASILPPQDS SFLAAMQIYQ MKDSCSSSDG SCNNQISYGK ELEYEYGGAG 240 GGGAASTTEQ MGLQNYFYNG VEDGPKLLGV GGGWGEKQNV LWGVNPIIDY GLEEIKQLIS 300 TRNCSNNFLF EESKTAEERV MYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	9e-77	MYB family protein