PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021669029.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 435aa    MW: 48739.4 Da    PI: 8.123
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021669029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.11.5e-08183203526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f+r G C++Gd+C FaHg
  XP_021669029.1 183 VCSEFRR-GGCSRGDTCEFAHG 203
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MYTYIRPTPL LPSPSTLISC PLPCEIRSPV LSGYFVLDFL FYPCKMSSIC ADQHKLYPSH  60
QLISSSFSKK SFKDLEIPAP RKLLTKKNLI DSPDNIKSPY YESNLQNLLP CTDSINGDLD  120
HSRGKVDDED LDPYSSDRFR MYEFKIRRCT RSHSHDWTDC PFAHPGEKAR RRDPRKYHYS  180
GTVCSEFRRG GCSRGDTCEF AHGVFEIWLH PSRYRTEACK DGKNCKRKIC FFAHSARQLR  240
IIPEVSCEAG KYDEGLALPS SLNHGHCCCL ACHFVISSPT STLLGMANMS PPVSPSLSPP  300
LSQVKKRSIS GFSPISRYTN RLSKLRSGVM SYKDVLAELM TSLEAMNFKN EAAAASSPIS  360
FSAANSIPWM DSSFNGEDHH QQLILSPSTP HPCGGSRNFF SGDCSSKGFI DEKINNDVKN  420
GGPDPDLVWV NELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.19e-80C3H family protein