PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021668578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 248aa MW: 25589.8 Da PI: 8.0101 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.7 | 1.3e-40 | 32 | 132 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael XP_021668578.1 32 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVSHIFALQQQVVNLQAEL 126 7***********************9989******************************************************************* PP DUF260 95 allkee 100 ++l+++ XP_021668578.1 127 SYLQTH 132 *99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MSATVNPSSS GGSGSSCGGG GGSSSSSGGS GPCGACKFLR RKCVPGCIFA PYFDSEQGAA 60 HFAAVHKVFG ASNVSKLLLH IPVHKRLDAV VTVCYEAQAR LRDPVYGCVS HIFALQQQVV 120 NLQAELSYLQ THLATLELPS PPAPPPPPAT LVTSPPLSIA DLPSASSVPT TYDLSSLFDP 180 MTQPSWAMQQ RQMDPRQFGG STGSSSATSG GGDLQSLARE LLHRNGSPPQ GSMSCTGSLS 240 SPSISKRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45420.1 | 9e-79 | LBD family protein |