PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668475.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 512aa MW: 56872.6 Da PI: 4.6893

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.7	2.4e-35	176	267	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk++e++ed+e+++++sw++n +sf+v+d +ef+k++LpkyFkh nf+SF+RQLn+YgF+kv+ ++ weF++++F+ gk++ll++ XP_021668475.1 176 FLKKTFEMVEDPETDSTVSWNKNRDSFIVWDAHEFSKHLLPKYFKHCNFSSFIRQLNTYGFRKVDPDR---------WEFANEWFRGGKRHLLKN 261 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_021668475.1 262 IKRRSR 267 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MVAPDVNSSG VGTRGDGDFS PSFATILLPE SLPQPAKTIE LPKDDKPIDL VTNVKAEEML 60 VVPDSRPVTC AACGEASYDG PSSSSSSSIK TTEIKKAAAA AEETVKVVMI KEEEEVEDTG 120 AISVVHYGNC INVGGGDGDG DCDGGGVNGN GSSSSSSSVD LPKPMEGLHE TGPPPFLKKT 180 FEMVEDPETD STVSWNKNRD SFIVWDAHEF SKHLLPKYFK HCNFSSFIRQ LNTYGFRKVD 240 PDRWEFANEW FRGGKRHLLK NIKRRSRYNK REQGAANGGD SAKPGTEVEI ENLKNDRDLL 300 KVEILKLSQQ QENSENQLSI VEQRTRVAEC KQLQMFIFLS KAAKNRGFIQ NLIPKRKQQR 360 ELDGSELKKR RLLPTQVPEN LPDAADANQS VNCRYQAQEQ LATMQTELAE ILREDTETNT 420 MLKLFGAPMS DEFCSPIQDQ KANLICGTND RESVHHLMSE KLLDDDSVSE NLVEEDVEVN 480 DSKFYLELED LIGKPRTWGG YVTEMVEHAG CT

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MVAPDVNSSG VGTRGDGDFS PSFATILLPE SLPQPAKTIE LPKDDKPIDL VTNVKAEEML  60
VVPDSRPVTC AACGEASYDG PSSSSSSSIK TTEIKKAAAA AEETVKVVMI KEEEEVEDTG  120
AISVVHYGNC INVGGGDGDG DCDGGGVNGN GSSSSSSSVD LPKPMEGLHE TGPPPFLKKT  180
FEMVEDPETD STVSWNKNRD SFIVWDAHEF SKHLLPKYFK HCNFSSFIRQ LNTYGFRKVD  240
PDRWEFANEW FRGGKRHLLK NIKRRSRYNK REQGAANGGD SAKPGTEVEI ENLKNDRDLL  300
KVEILKLSQQ QENSENQLSI VEQRTRVAEC KQLQMFIFLS KAAKNRGFIQ NLIPKRKQQR  360
ELDGSELKKR RLLPTQVPEN LPDAADANQS VNCRYQAQEQ LATMQTELAE ILREDTETNT  420
MLKLFGAPMS DEFCSPIQDQ KANLICGTND RESVHHLMSE KLLDDDSVSE NLVEEDVEVN  480
DSKFYLELED LIGKPRTWGG YVTEMVEHAG CT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	265	LKNIKRR
2	355	371	KRKQQRELDGSELKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	6e-73	HSF family protein