PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668467.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 569aa MW: 64798.2 Da PI: 8.0057

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5e-13	389	433	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN++fe Lr++lP+ K +Ka++L+++ eY+ sL XP_021668467.1 389 HMISERRRREKINESFEALRKILPTE-----AKKDKASVLTRTREYLTSL 433 8899*******************6.....599***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HSLHFMDGYY HEEASQPGSS 60 SGSLARRLFD EYRRKEFFVV NDRVPGMAFI NNQPYRELNE SELQRMASVA VQQRFYQEAR 120 IKTAVFMGCR SGEIEMGWSN GMTQINMENA MRSLFPEDIP HQQSPLRELS QAVDPNRPSS 180 SSSSLRSLSM DSPDSSPFLF NIPTSQISEI PQETPLLQPI QSTSSAIQQV LQSLQRVQST 240 TSPLQLAMQS LQPVPSTTSP LQPATQSFQP IPSTTSPHQA AMQAFALTRN IQLPSRESED 300 AAMTRAILAV LTSPSSSTSS SITPNLPYHY RESQRTSAFK NYLTPTRLMS QSLRKQSMLK 360 RAITYYRSLN TVRREHMLAS RPTSTQLHHM ISERRRREKI NESFEALRKI LPTEAKKDKA 420 SVLTRTREYL TSLKAQVEEL SKRNQQLEAQ VLQQLPAKEV AQEESETSST ERVELRLAHV 480 SESTSEEQRI IDLQVVLRGE CPIQDMVIRI LEFLNQVNNV NVMSVEANTR TTESRSMNRV 540 ILRLKIEGEE WDESAFQEAV RRVVADLAQ

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HSLHFMDGYY HEEASQPGSS  60
SGSLARRLFD EYRRKEFFVV NDRVPGMAFI NNQPYRELNE SELQRMASVA VQQRFYQEAR  120
IKTAVFMGCR SGEIEMGWSN GMTQINMENA MRSLFPEDIP HQQSPLRELS QAVDPNRPSS  180
SSSSLRSLSM DSPDSSPFLF NIPTSQISEI PQETPLLQPI QSTSSAIQQV LQSLQRVQST  240
TSPLQLAMQS LQPVPSTTSP LQPATQSFQP IPSTTSPHQA AMQAFALTRN IQLPSRESED  300
AAMTRAILAV LTSPSSSTSS SITPNLPYHY RESQRTSAFK NYLTPTRLMS QSLRKQSMLK  360
RAITYYRSLN TVRREHMLAS RPTSTQLHHM ISERRRREKI NESFEALRKI LPTEAKKDKA  420
SVLTRTREYL TSLKAQVEEL SKRNQQLEAQ VLQQLPAKEV AQEESETSST ERVELRLAHV  480
SESTSEEQRI IDLQVVLRGE CPIQDMVIRI LEFLNQVNNV NVMSVEANTR TTESRSMNRV  540
ILRLKIEGEE WDESAFQEAV RRVVADLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	393	398	ERRRRE
2	394	399	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-59	bHLH family protein