PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668190.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 590aa MW: 63945.9 Da PI: 6.8318

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	336	394	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ XP_021668190.1 336 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCADDRTILITTYEGSHNHP 394 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MDKGWGLALD SDPHISFNKP SSAPVLDSFF KIKKNLDVPD SVKMFPFPVT VSRRDDHASP 60 SAADDNRVVV GEVDFFSDSK NIAVSDKRND DDESKATCVT VKKENSYGEA APRSSLHVNT 120 GLHLLTANTG SDQSTVDDGV SSDVDDKRSK SELAQLQVEL QRMNVENQRL RDMLSQVTNN 180 YNALQMHLVA LMQQQQQQQQ QNHGTEANQE HEVVQVKPEE KKHEVVPRQF LDLGPSAETD 240 EMSHSSSDER TRSATPLANM ETASVKNSAN QENSSFRDGK RIGREESPDS GSQGWNHSKV 300 QKLNSPPSKG IDQSTEATMR KARVSVRARS EAPMITDGCQ WRKYGQKMAK GNPCPRAYYR 360 CTMAVGCPVR KQVQRCADDR TILITTYEGS HNHPLPPAAV AMASTTTAAA SMLLSGSMSS 420 ADGLMNPNLL ARAILPCSSS MATISASAPF PTVTLDLTHN PNSQQVLRPP THLQVPFAGQ 480 PQNFASVTAP QLPQVFGQAL YNQSKFSGLQ LSQEMGSSQL HHQSQPQQLQ PAQQPSLVDT 540 VNAATAAITA DPNFTAALAA AISSIISGAN GNATTSNNNG NITNNTSNRN

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MDKGWGLALD SDPHISFNKP SSAPVLDSFF KIKKNLDVPD SVKMFPFPVT VSRRDDHASP  60
SAADDNRVVV GEVDFFSDSK NIAVSDKRND DDESKATCVT VKKENSYGEA APRSSLHVNT  120
GLHLLTANTG SDQSTVDDGV SSDVDDKRSK SELAQLQVEL QRMNVENQRL RDMLSQVTNN  180
YNALQMHLVA LMQQQQQQQQ QNHGTEANQE HEVVQVKPEE KKHEVVPRQF LDLGPSAETD  240
EMSHSSSDER TRSATPLANM ETASVKNSAN QENSSFRDGK RIGREESPDS GSQGWNHSKV  300
QKLNSPPSKG IDQSTEATMR KARVSVRARS EAPMITDGCQ WRKYGQKMAK GNPCPRAYYR  360
CTMAVGCPVR KQVQRCADDR TILITTYEGS HNHPLPPAAV AMASTTTAAA SMLLSGSMSS  420
ADGLMNPNLL ARAILPCSSS MATISASAPF PTVTLDLTHN PNSQQVLRPP THLQVPFAGQ  480
PQNFASVTAP QLPQVFGQAL YNQSKFSGLQ LSQEMGSSQL HHQSQPQQLQ PAQQPSLVDT  540
VNAATAAITA DPNFTAALAA AISSIISGAN GNATTSNNNG NITNNTSNRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-139	WRKY family protein