PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668035.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 313aa    MW: 35103.2 Da    PI: 6.8984
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.12.7e-4271061100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC+++Cv+apyfp +qp+kfa vhk+FGasnv+kll++l+  +reda++sl+yeAe r+rdPvyG+vg+i+ lq++l+ql++el 
  XP_021668035.1   7 PCAACKLLRRKCTQECVFAPYFPPDQPQKFASVHKVFGASNVSKLLNDLNAAQREDAVNSLAYEAEERLRDPVYGCVGLISILQKRLKQLQSELY 101
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     ++k+e
  XP_021668035.1 102 HAKKE 106
                     99887 PP

Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MSSSNSPCAA CKLLRRKCTQ ECVFAPYFPP DQPQKFASVH KVFGASNVSK LLNDLNAAQR  60
EDAVNSLAYE AEERLRDPVY GCVGLISILQ KRLKQLQSEL YHAKKELAEY IGPSAMLPIL  120
QPSTFMPQQH MGNPSASNVM PHNMLPMMGI PTGPADGGQL MISEHPQQSH QHPTHQQQQQ  180
QQFFEAQQLA AAVAVRDQQE MFRTYDQQQH QDQSQHQQEL VRFNSGFDAT GSVTATGYNQ  240
LSAASAMSPS LALATYDNPY QIQPQVEHHH HHHHHQLQPQ LFLQPQQQQP LQQTQQQQQR  300
SGSEEGRSVG PSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.13e-80LBD family protein