PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021668035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 313aa MW: 35103.2 Da PI: 6.8984 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.1 | 2.7e-42 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfa vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lq++l+ql++el XP_021668035.1 7 PCAACKLLRRKCTQECVFAPYFPPDQPQKFASVHKVFGASNVSKLLNDLNAAQREDAVNSLAYEAEERLRDPVYGCVGLISILQKRLKQLQSELY 101 7*********************************************************************************************9 PP DUF260 96 llkee 100 ++k+e XP_021668035.1 102 HAKKE 106 99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MSSSNSPCAA CKLLRRKCTQ ECVFAPYFPP DQPQKFASVH KVFGASNVSK LLNDLNAAQR 60 EDAVNSLAYE AEERLRDPVY GCVGLISILQ KRLKQLQSEL YHAKKELAEY IGPSAMLPIL 120 QPSTFMPQQH MGNPSASNVM PHNMLPMMGI PTGPADGGQL MISEHPQQSH QHPTHQQQQQ 180 QQFFEAQQLA AAVAVRDQQE MFRTYDQQQH QDQSQHQQEL VRFNSGFDAT GSVTATGYNQ 240 LSAASAMSPS LALATYDNPY QIQPQVEHHH HHHHHQLQPQ LFLQPQQQQP LQQTQQQQQR 300 SGSEEGRSVG PSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 3e-80 | LBD family protein |