PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668010.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 299aa MW: 33464.6 Da PI: 7.1684

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.8	1.6e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll++l++ +reda++sl+yeAear++dPvyG+vg+i+ lq++l++l+++l XP_021668010.1 7 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNTVQREDAVNSLAYEAEARLHDPVYGCVGLISILQHRLKELQSDLF 101 7********************************************************************************************98 PP DUF260 96 llkee 100 +k+e XP_021668010.1 102 NAKKE 106 88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MSTPNSPCAA CKFLRRKCTQ ECVFAPYFPP DQPQKFANVH KVFGASNVAK LLNELNTVQR 60 EDAVNSLAYE AEARLHDPVY GCVGLISILQ HRLKELQSDL FNAKKELAQY IGSQAMLPTL 120 QSPTYMPQPH LGNPNASSLM QHGALPMMGI PSRPTNGGQL MIRETQQQQQ QQQRQNQFFE 180 AQQLAAALAV REQQDMFRAY EQQQEIVRFN RGFDAVDSIA TTGFNQITVA AISPSLALGS 240 FDTPYQVQPQ QVDHHQHHQL QAQLFLQPQP HEQQQHSQQT HQQHQPSGSD KGGSIGLTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-82	LBD family protein