PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667889.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 389aa MW: 42996.9 Da PI: 8.4759

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	122	167	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+ + gR++k+c++rw++ XP_021667889.1 122 RGHWRPAEDAKLKELVAQFGPQNWNLIAENLE-GRSGKSCRLRWFNQ 167 899***************************.*********996 PP
2	Myb_DNA-binding	58.3	1.7e-18	174	217	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_021667889.1 174 RMAFTEEEEERLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 217 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MSLQHVRSDN KGFSGYQDIN FLPPPATSQL SLANTFEVMG NPRETETKNP QVGFQIFRHS 60 VDQNGKPWSI QQVGSRGTKR PRDGSDGLFG VQKKVLSLNL DEEEEPKSSA PGKNGHTKLC 120 ARGHWRPAED AKLKELVAQF GPQNWNLIAE NLEGRSGKSC RLRWFNQLDP RINRMAFTEE 180 EEERLLAAHR LYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKHREQSSIY RKRKPSSSSQ 240 IVPPIKELDV NLQNNACSES TTISSTIDES ASTCTDLSLS PSAKAHNKLF TRFSPQGAPM 300 GSAEKEMKVG NVEFDKFYCS SGGKGFYQIG SMSVVTGLDQ SGQSDSNSEV SATESVGTNR 360 INPSLSGDNE DGNEKINASF IDFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MSLQHVRSDN KGFSGYQDIN FLPPPATSQL SLANTFEVMG NPRETETKNP QVGFQIFRHS  60
VDQNGKPWSI QQVGSRGTKR PRDGSDGLFG VQKKVLSLNL DEEEEPKSSA PGKNGHTKLC  120
ARGHWRPAED AKLKELVAQF GPQNWNLIAE NLEGRSGKSC RLRWFNQLDP RINRMAFTEE  180
EEERLLAAHR LYGNKWAMIA RLFPGRTDNA VKNHWHVIMA RKHREQSSIY RKRKPSSSSQ  240
IVPPIKELDV NLQNNACSES TTISSTIDES ASTCTDLSLS PSAKAHNKLF TRFSPQGAPM  300
GSAEKEMKVG NVEFDKFYCS SGGKGFYQIG SMSVVTGLDQ SGQSDSNSEV SATESVGTNR  360
INPSLSGDNE DGNEKINASF IDFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-67	MYB family protein