PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021667818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 243aa MW: 26647.9 Da PI: 6.2231 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.8 | 4.1e-39 | 42 | 143 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r++a+ ++ yeA+ar++dPvyG+v++il+lqqq+++l+ael XP_021667818.1 42 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPMNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAEL 136 7***********************9989******************************************************************* PP DUF260 95 allkeel 101 a+++++l XP_021667818.1 137 AMVQSQL 143 ***9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MADPQCDDTS DTRRKGIGKR GSSMPVESQS VAEPTPVPSV APCGACKFLR RKCISGCIFA 60 PHFGSDQGAA RFAAVHKVFG ASNVSKLLLH IPMNRRHEAV VTISYEAQAR LSDPVYGCVS 120 TILALQQQVA SLQAELAMVQ SQLINSRFAM ANFLQNPQQQ QQQHQQQQQV AMLQPAYSNN 180 SSASTNLIHM SSFTSNFDIV TDTAPSSHSL EPLQLSRPSH DEEDDEEESQ IPGIFVDEIL 240 HQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 1e-69 | LBD family protein |